Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.01□□□□□ -1.61
COL8A2P25067 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
COL8A2P25067 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL8A2P25067 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.01□□□□□ -1.61
COL8A2P25067 AC022164.1-201ENST00000568767 2673 ntBASIC5□□□□□ -1.61
COL8A2P25067 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
COL8A2P25067 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5□□□□□ -1.61
COL8A2P25067 AC015689.2-201ENST00000528172 1738 ntBASIC5□□□□□ -1.61
COL8A2P25067 AC123769.1-201ENST00000530992 3192 ntBASIC5□□□□□ -1.61
COL8A2P25067 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL8A2P25067 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
COL8A2P25067 ZNF402P-201ENST00000404435 3100 ntBASIC5□□□□□ -1.61
COL8A2P25067 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5□□□□□ -1.61
COL8A2P25067 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 AL731532.1-201ENST00000623972 4236 ntBASIC5□□□□□ -1.61
COL8A2P25067 RN7SKP69-201ENST00000365390 305 ntBASIC5□□□□□ -1.61
COL8A2P25067 SNORA17A-201ENST00000391185 133 ntBASIC5□□□□□ -1.61
COL8A2P25067 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5□□□□□ -1.61
COL8A2P25067 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5□□□□□ -1.61
COL8A2P25067 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5□□□□□ -1.61
COL8A2P25067 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5□□□□□ -1.61
COL8A2P25067 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5□□□□□ -1.61
COL8A2P25067 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5□□□□□ -1.61
COL8A2P25067 BX679664.2-201ENST00000439282 283 ntBASIC5□□□□□ -1.61
COL8A2P25067 RPS7P3-201ENST00000443360 580 ntBASIC5□□□□□ -1.61
COL8A2P25067 AL161636.2-201ENST00000445179 927 ntBASIC5□□□□□ -1.61
COL8A2P25067 AL445665.1-202ENST00000452436 324 ntBASIC5□□□□□ -1.61
COL8A2P25067 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5□□□□□ -1.61
COL8A2P25067 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5□□□□□ -1.61
COL8A2P25067 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
COL8A2P25067 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5□□□□□ -1.61
COL8A2P25067 AC112191.2-201ENST00000522428 333 ntBASIC5□□□□□ -1.61
COL8A2P25067 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5□□□□□ -1.61
COL8A2P25067 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5□□□□□ -1.61
COL8A2P25067 AC079600.1-201ENST00000550326 297 ntBASIC5□□□□□ -1.61
COL8A2P25067 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5□□□□□ -1.61
COL8A2P25067 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5□□□□□ -1.61
COL8A2P25067 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5□□□□□ -1.61
COL8A2P25067 AC007494.1-201ENST00000562293 760 ntBASIC5□□□□□ -1.61
COL8A2P25067 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5□□□□□ -1.61
COL8A2P25067 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5□□□□□ -1.61
COL8A2P25067 AL049840.6-201ENST00000604583 345 ntBASIC5□□□□□ -1.61
COL8A2P25067 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5□□□□□ -1.61
COL8A2P25067 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5□□□□□ -1.61
COL8A2P25067 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 AC005899.7-201ENST00000618199 588 ntBASIC5□□□□□ -1.61
COL8A2P25067 SNORA17.5-201ENST00000630429 132 ntBASIC5□□□□□ -1.61
COL8A2P25067 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5□□□□□ -1.61
COL8A2P25067 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5□□□□□ -1.61
COL8A2P25067 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 PDZK1P1-202ENST00000425209 1350 ntBASIC5□□□□□ -1.61
COL8A2P25067 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL8A2P25067 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL8A2P25067 AC087516.1-201ENST00000561236 2428 ntBASIC4.99□□□□□ -1.61
COL8A2P25067 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
COL8A2P25067 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL8A2P25067 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL8A2P25067 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL8A2P25067 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL8A2P25067 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.99□□□□□ -1.61
COL8A2P25067 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
COL8A2P25067 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
COL8A2P25067 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.99□□□□□ -1.61
COL8A2P25067 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL8A2P25067 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.99□□□□□ -1.61
COL8A2P25067 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL8A2P25067 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL8A2P25067 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
COL8A2P25067 RNA5SP514-201ENST00000363717 111 ntBASIC4.99□□□□□ -1.61
COL8A2P25067 RN7SKP292-201ENST00000365522 317 ntBASIC4.99□□□□□ -1.61
COL8A2P25067 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL8A2P25067 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC4.99□□□□□ -1.61
COL8A2P25067 AC016739.1-201ENST00000405359 345 ntBASIC4.99□□□□□ -1.61
COL8A2P25067 AL512422.1-201ENST00000407033 553 ntBASIC4.99□□□□□ -1.61
COL8A2P25067 RN7SKP206-201ENST00000410823 293 ntBASIC4.99□□□□□ -1.61
COL8A2P25067 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC4.99□□□□□ -1.61
COL8A2P25067 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.99□□□□□ -1.61
COL8A2P25067 BX119321.1-201ENST00000428912 797 ntBASIC4.99□□□□□ -1.61
COL8A2P25067 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC4.99□□□□□ -1.61
COL8A2P25067 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.99□□□□□ -1.61
COL8A2P25067 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.99□□□□□ -1.61
COL8A2P25067 AC002075.1-201ENST00000457396 676 ntBASIC4.99□□□□□ -1.61
COL8A2P25067 NXT1P1-201ENST00000458481 316 ntBASIC4.99□□□□□ -1.61
COL8A2P25067 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC4.99□□□□□ -1.61
COL8A2P25067 RN7SL101P-201ENST00000496350 279 ntBASIC4.99□□□□□ -1.61
COL8A2P25067 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC4.99□□□□□ -1.61
COL8A2P25067 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC4.99□□□□□ -1.61
COL8A2P25067 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
COL8A2P25067 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.99□□□□□ -1.61
COL8A2P25067 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms