Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AC126615.2-201ENST00000553003 515 ntBASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AC067773.1-201ENST00000603284 1094 ntBASIC5.91□□□□□ -1.46
HLA-DQB2P05538 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.91□□□□□ -1.46
HLA-DQB2P05538 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HLA-DQB2P05538 SNX18P3-202ENST00000565670 1750 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AL591135.1-201ENST00000401578 5914 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AL357752.1-201ENST00000412817 349 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AL590399.2-201ENST00000427536 309 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 CRIP1P1-201ENST00000427567 185 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 HMGN1P2-201ENST00000445197 310 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AC099521.1-201ENST00000482557 334 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 PFN1P8-201ENST00000497012 543 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AC105384.2-201ENST00000508433 640 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AL133481.2-203ENST00000607558 139 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AC129778.1-202ENST00000623812 261 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AC022919.1-201ENST00000624979 626 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AL591379.1-207ENST00000635982 261 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 OR8A1-204ENST00000642111 1145 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 OR52B5P-204ENST00000641744 3467 ntBASIC5.9□□□□□ -1.46
HLA-DQB2P05538 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
HLA-DQB2P05538 AC011933.2-201ENST00000578539 2790 ntBASIC5.9□□□□□ -1.47
HLA-DQB2P05538 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DQB2P05538 KYNUP3-201ENST00000574386 1341 ntBASIC5.9□□□□□ -1.47
HLA-DQB2P05538 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.9□□□□□ -1.47
HLA-DQB2P05538 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DQB2P05538 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DQB2P05538 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 RNA5SP91-201ENST00000390902 119 ntBASIC5.89□□□□□ -1.47
HLA-DQB2P05538 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.89□□□□□ -1.47
HLA-DQB2P05538 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.89□□□□□ -1.47
HLA-DQB2P05538 EIF5AP4-201ENST00000441206 465 ntBASIC5.89□□□□□ -1.47
HLA-DQB2P05538 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 ST13P12-201ENST00000508958 1094 ntBASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 RN7SKP70-201ENST00000516655 271 ntBASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AC139365.2-201ENST00000517972 253 ntBASIC5.89□□□□□ -1.47
HLA-DQB2P05538 SUMO2P19-201ENST00000518920 295 ntBASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 HMGN2P36-201ENST00000529541 409 ntBASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 DPPA3P2-202ENST00000557188 1219 ntBASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AC092121.1-201ENST00000569452 202 ntBASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DQB2P05538 AL513327.3-201ENST00000602618 469 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms