Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SYT14P1-202ENST00000600441 1448 ntBASIC5.55□□□□□ -1.52
MT-ND1P03886 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
MT-ND1P03886 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
MT-ND1P03886 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
MT-ND1P03886 AC093671.1-201ENST00000624981 2929 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
MT-ND1P03886 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
MT-ND1P03886 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 RNU105B-201ENST00000364478 208 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
MT-ND1P03886 RN7SKP144-201ENST00000411108 279 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.54□□□□□ -1.52
MT-ND1P03886 AC009506.2-201ENST00000420635 840 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AL354766.1-201ENST00000423396 542 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.54□□□□□ -1.52
MT-ND1P03886 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.54□□□□□ -1.52
MT-ND1P03886 AC138761.5-201ENST00000433967 325 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.54□□□□□ -1.52
MT-ND1P03886 OR3D1P-201ENST00000438288 955 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AC245291.3-201ENST00000443400 292 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 MED28P3-201ENST00000444288 531 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 RPS18P1-201ENST00000447840 458 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.54□□□□□ -1.52
MT-ND1P03886 SEPT14P1-201ENST00000458703 648 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 RN7SL836P-201ENST00000476140 296 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AC117500.1-201ENST00000497352 755 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.54□□□□□ -1.52
MT-ND1P03886 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.54□□□□□ -1.52
MT-ND1P03886 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.54□□□□□ -1.52
MT-ND1P03886 RNU6-943P-201ENST00000516960 98 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.54□□□□□ -1.52
MT-ND1P03886 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.54□□□□□ -1.52
MT-ND1P03886 AC021269.1-201ENST00000526860 705 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 HMGN1P26-201ENST00000558737 303 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.54□□□□□ -1.52
MT-ND1P03886 ZNF322P1-201ENST00000568013 1209 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.54□□□□□ -1.52
MT-ND1P03886 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.54□□□□□ -1.52
MT-ND1P03886 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.54□□□□□ -1.52
MT-ND1P03886 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.54□□□□□ -1.52
MT-ND1P03886 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.54□□□□□ -1.52
MT-ND1P03886 AL513327.3-201ENST00000602618 469 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AP001823.1-201ENST00000604056 1003 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AC087468.1-201ENST00000604365 630 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AL713998.2-201ENST00000604538 1198 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AC089999.3-201ENST00000622440 577 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 AL122023.1-201ENST00000622847 530 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.54□□□□□ -1.52
MT-ND1P03886 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.54□□□□□ -1.52
MT-ND1P03886 AC099654.15-201ENST00000639802 509 ntBASIC5.54□□□□□ -1.52
MT-ND1P03886 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
MT-ND1P03886 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
MT-ND1P03886 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.54□□□□□ -1.52
MT-ND1P03886 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
MT-ND1P03886 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MT-ND1P03886 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MT-ND1P03886 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.53□□□□□ -1.52
MT-ND1P03886 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MT-ND1P03886 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
MT-ND1P03886 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
MT-ND1P03886 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
MT-ND1P03886 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MT-ND1P03886 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.53□□□□□ -1.52
MT-ND1P03886 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.53□□□□□ -1.52
MT-ND1P03886 SNORA64.3-201ENST00000365647 134 ntBASIC5.53□□□□□ -1.52
MT-ND1P03886 AC007068.1-201ENST00000396690 844 ntBASIC5.53□□□□□ -1.52
MT-ND1P03886 AL139805.1-201ENST00000407837 289 ntBASIC5.53□□□□□ -1.52
MT-ND1P03886 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.53□□□□□ -1.52
MT-ND1P03886 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.53□□□□□ -1.52
MT-ND1P03886 NMD3P2-201ENST00000421815 761 ntBASIC5.53□□□□□ -1.52
MT-ND1P03886 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.53□□□□□ -1.52
MT-ND1P03886 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.53□□□□□ -1.52
MT-ND1P03886 ARMC4P1-201ENST00000438905 707 ntBASIC5.53□□□□□ -1.52
MT-ND1P03886 AL645936.1-201ENST00000441979 518 ntBASIC5.53□□□□□ -1.52
MT-ND1P03886 AC092601.1-201ENST00000444526 383 ntBASIC5.53□□□□□ -1.52
MT-ND1P03886 AC234771.2-201ENST00000445718 597 ntBASIC5.53□□□□□ -1.52
MT-ND1P03886 ZNF619P1-201ENST00000446539 752 ntBASIC5.53□□□□□ -1.52
MT-ND1P03886 HMGB3P14-201ENST00000494195 599 ntBASIC5.53□□□□□ -1.52
MT-ND1P03886 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.53□□□□□ -1.52
MT-ND1P03886 AC095052.1-201ENST00000509955 863 ntBASIC5.53□□□□□ -1.52
MT-ND1P03886 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.53□□□□□ -1.52
MT-ND1P03886 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.53□□□□□ -1.52
MT-ND1P03886 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
MT-ND1P03886 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms