Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.08□□□□□ -1.44
GPC4O75487 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.08□□□□□ -1.44
GPC4O75487 HMGN1P17-201ENST00000513734 295 ntBASIC6.08□□□□□ -1.44
GPC4O75487 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.08□□□□□ -1.44
GPC4O75487 Y_RNA.710-201ENST00000516975 110 ntBASIC6.08□□□□□ -1.44
GPC4O75487 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.08□□□□□ -1.44
GPC4O75487 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.08□□□□□ -1.44
GPC4O75487 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GPC4O75487 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GPC4O75487 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.08□□□□□ -1.44
GPC4O75487 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.08□□□□□ -1.44
GPC4O75487 AC245128.3-201ENST00000594721 748 ntBASIC6.08□□□□□ -1.44
GPC4O75487 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
GPC4O75487 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.08□□□□□ -1.44
GPC4O75487 AL360012.1-201ENST00000602813 131 ntBASIC6.08□□□□□ -1.44
GPC4O75487 AP001823.1-201ENST00000604056 1003 ntBASIC6.08□□□□□ -1.44
GPC4O75487 LSM1P2-201ENST00000604911 322 ntBASIC6.08□□□□□ -1.44
GPC4O75487 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.08□□□□□ -1.44
GPC4O75487 uc_338.31-201ENST00000615595 186 ntBASIC6.08□□□□□ -1.44
GPC4O75487 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.08□□□□□ -1.44
GPC4O75487 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.08□□□□□ -1.44
GPC4O75487 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
GPC4O75487 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GPC4O75487 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GPC4O75487 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
GPC4O75487 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.08□□□□□ -1.44
GPC4O75487 AC024651.2-201ENST00000562480 2098 ntBASIC6.08□□□□□ -1.44
GPC4O75487 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
GPC4O75487 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
GPC4O75487 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.08□□□□□ -1.44
GPC4O75487 AL359091.1-201ENST00000449048 1734 ntBASIC6.08□□□□□ -1.44
GPC4O75487 AC011416.1-201ENST00000514947 1732 ntBASIC6.08□□□□□ -1.44
GPC4O75487 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
GPC4O75487 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.07□□□□□ -1.44
GPC4O75487 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
GPC4O75487 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 AC093671.1-201ENST00000624981 2929 ntBASIC6.07□□□□□ -1.44
GPC4O75487 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
GPC4O75487 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 YWHAZP6-201ENST00000399764 738 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AL096800.1-201ENST00000405326 893 ntBASIC6.07□□□□□ -1.44
GPC4O75487 RN7SKP86-201ENST00000410454 332 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.07□□□□□ -1.44
GPC4O75487 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.07□□□□□ -1.44
GPC4O75487 AC021876.1-201ENST00000425959 359 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AL365220.1-201ENST00000432923 399 ntBASIC6.07□□□□□ -1.44
GPC4O75487 NDUFA5P8-201ENST00000449019 346 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AC112187.1-201ENST00000455837 479 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6.07□□□□□ -1.44
GPC4O75487 AC005165.2-201ENST00000466070 380 ntBASIC6.07□□□□□ -1.44
GPC4O75487 RPL12P30-201ENST00000488389 499 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AC090958.1-201ENST00000511122 351 ntBASIC6.07□□□□□ -1.44
GPC4O75487 CYP4F27P-201ENST00000514557 494 ntBASIC6.07□□□□□ -1.44
GPC4O75487 RNA5SP434-201ENST00000516647 121 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.07□□□□□ -1.44
GPC4O75487 AC008429.4-201ENST00000521201 182 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.07□□□□□ -1.44
GPC4O75487 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 AC092865.1-201ENST00000544395 1023 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.07□□□□□ -1.44
GPC4O75487 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.07□□□□□ -1.44
GPC4O75487 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.07□□□□□ -1.44
GPC4O75487 AC067805.1-201ENST00000559344 470 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.07□□□□□ -1.44
GPC4O75487 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.07□□□□□ -1.44
GPC4O75487 AC004232.2-201ENST00000574245 821 ntBASIC6.07□□□□□ -1.44
GPC4O75487 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.07□□□□□ -1.44
GPC4O75487 AP005136.2-201ENST00000583253 1049 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.07□□□□□ -1.44
GPC4O75487 SMIM12P1-201ENST00000603004 274 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AC005828.7-201ENST00000607331 556 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AC018690.1-201ENST00000608144 626 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AC022106.1-201ENST00000612834 766 ntBASIC6.07□□□□□ -1.44
GPC4O75487 MIR6889-201ENST00000613185 59 ntBASIC6.07□□□□□ -1.44
GPC4O75487 AL137067.2-201ENST00000621202 131 ntBASIC6.07□□□□□ -1.44
GPC4O75487 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.07□□□□□ -1.44
GPC4O75487 AC111152.1-202ENST00000635848 339 ntBASIC6.07□□□□□ -1.44
GPC4O75487 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 AC018717.1-201ENST00000457712 1505 ntBASIC6.07□□□□□ -1.44
GPC4O75487 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
GPC4O75487 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.07□□□□□ -1.44
GPC4O75487 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
GPC4O75487 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.07□□□□□ -1.44
GPC4O75487 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.07□□□□□ -1.44
GPC4O75487 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GPC4O75487 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
GPC4O75487 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms