Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
FOXN3O00409 AL359091.1-201ENST00000449048 1734 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 HIGD1AP16-201ENST00000450986 258 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.63□□□□□ -1.35
FOXN3O00409 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.63□□□□□ -1.35
FOXN3O00409 RPS7P10-201ENST00000464254 603 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 RPL34P33-201ENST00000486062 334 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 AC024587.1-201ENST00000505925 2157 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
FOXN3O00409 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.63□□□□□ -1.35
FOXN3O00409 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 BCAS2P1-201ENST00000528022 632 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.63□□□□□ -1.35
FOXN3O00409 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
FOXN3O00409 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.63□□□□□ -1.35
FOXN3O00409 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.63□□□□□ -1.35
FOXN3O00409 AC005632.2-201ENST00000564271 828 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 AC079148.1-201ENST00000565944 819 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 WBP1LP12-201ENST00000604449 331 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.63□□□□□ -1.35
FOXN3O00409 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
FOXN3O00409 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.63□□□□□ -1.35
FOXN3O00409 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.63□□□□□ -1.35
FOXN3O00409 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.63□□□□□ -1.35
FOXN3O00409 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXN3O00409 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
FOXN3O00409 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.63□□□□□ -1.35
FOXN3O00409 LINC01613-201ENST00000561476 2780 ntBASIC6.63□□□□□ -1.35
FOXN3O00409 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
FOXN3O00409 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FOXN3O00409 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FOXN3O00409 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FOXN3O00409 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
FOXN3O00409 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXN3O00409 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXN3O00409 AC018717.1-201ENST00000457712 1505 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.62□□□□□ -1.35
FOXN3O00409 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
FOXN3O00409 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.62□□□□□ -1.35
FOXN3O00409 MTHFD2P5-201ENST00000320415 844 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXN3O00409 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
FOXN3O00409 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXN3O00409 PTGES3P2-201ENST00000407942 482 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 GTF3AP1-201ENST00000416942 1004 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.62□□□□□ -1.35
FOXN3O00409 RAB28P3-201ENST00000448325 597 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.62□□□□□ -1.35
FOXN3O00409 RPL7L1P3-201ENST00000455249 689 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 AC004890.1-201ENST00000461005 181 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 AC108729.2-201ENST00000476543 840 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 HMGN1P16-201ENST00000508308 283 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.62□□□□□ -1.35
FOXN3O00409 RFPL4AP3-201ENST00000515267 345 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.62□□□□□ -1.35
FOXN3O00409 AC036111.2-201ENST00000533247 901 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.62□□□□□ -1.35
FOXN3O00409 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.62□□□□□ -1.35
FOXN3O00409 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.62□□□□□ -1.35
FOXN3O00409 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.62□□□□□ -1.35
FOXN3O00409 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.62□□□□□ -1.35
FOXN3O00409 AC005776.1-201ENST00000603164 290 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.62□□□□□ -1.35
FOXN3O00409 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 AL445493.3-201ENST00000619568 477 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 AC018628.1-201ENST00000624147 3819 ntBASIC6.62□□□□□ -1.35
FOXN3O00409 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.62□□□□□ -1.35
FOXN3O00409 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
FOXN3O00409 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
FOXN3O00409 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXN3O00409 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.62□□□□□ -1.35
FOXN3O00409 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
FOXN3O00409 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXN3O00409 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
FOXN3O00409 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXN3O00409 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
FOXN3O00409 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXN3O00409 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
FOXN3O00409 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
FOXN3O00409 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.61□□□□□ -1.35
FOXN3O00409 EIF3EP1-201ENST00000433978 1316 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 SNORD115-48-201ENST00000364764 76 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.61□□□□□ -1.35
FOXN3O00409 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms