Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.56□□□□□ -1.52
UPK1AO00322 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPK1AO00322 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
UPK1AO00322 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UPK1AO00322 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPK1AO00322 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UPK1AO00322 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
UPK1AO00322 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UPK1AO00322 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
UPK1AO00322 RNU6-316P-201ENST00000391027 107 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 AC087752.1-201ENST00000391360 558 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UPK1AO00322 RPL35AP3-201ENST00000414680 288 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 RPS27AP6-201ENST00000427962 448 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 AC138761.5-201ENST00000433967 325 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 NPM1P18-201ENST00000434232 732 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UPK1AO00322 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.56□□□□□ -1.52
UPK1AO00322 CLNS1AP1-201ENST00000435954 682 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 RPL6P30-201ENST00000443382 862 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 RBMY2AP-201ENST00000445405 1157 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 RBMY2CP-201ENST00000448575 1157 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 RBMY2DP-202ENST00000448881 1157 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 RBMY2BP-202ENST00000451071 1156 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 AL603882.1-201ENST00000463059 681 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 RN7SL269P-201ENST00000467795 305 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 AC023245.1-201ENST00000468501 517 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 AC092865.4-201ENST00000477936 615 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 EIF4E2P2-201ENST00000492033 736 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 AC008629.2-201ENST00000503783 483 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.56□□□□□ -1.52
UPK1AO00322 PRMT5P1-201ENST00000514351 598 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.56□□□□□ -1.52
UPK1AO00322 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.56□□□□□ -1.52
UPK1AO00322 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
UPK1AO00322 AC084121.1-201ENST00000533882 835 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.56□□□□□ -1.52
UPK1AO00322 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.56□□□□□ -1.52
UPK1AO00322 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.56□□□□□ -1.52
UPK1AO00322 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.56□□□□□ -1.52
UPK1AO00322 AL845552.1-201ENST00000556820 323 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.56□□□□□ -1.52
UPK1AO00322 AC007346.2-201ENST00000564816 892 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.56□□□□□ -1.52
UPK1AO00322 AC092266.1-201ENST00000610958 165 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.56□□□□□ -1.52
UPK1AO00322 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.56□□□□□ -1.52
UPK1AO00322 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.56□□□□□ -1.52
UPK1AO00322 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPK1AO00322 AC011933.2-201ENST00000578539 2790 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
UPK1AO00322 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
UPK1AO00322 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPK1AO00322 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.56□□□□□ -1.52
UPK1AO00322 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UPK1AO00322 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
UPK1AO00322 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.56□□□□□ -1.52
UPK1AO00322 AC012254.3-201ENST00000591183 2117 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
UPK1AO00322 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPK1AO00322 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.55□□□□□ -1.52
UPK1AO00322 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
UPK1AO00322 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPK1AO00322 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
UPK1AO00322 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
UPK1AO00322 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPK1AO00322 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
UPK1AO00322 RN7SKP185-201ENST00000362813 326 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPK1AO00322 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
UPK1AO00322 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.55□□□□□ -1.52
UPK1AO00322 AL096711.1-201ENST00000404780 554 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.55□□□□□ -1.52
UPK1AO00322 AL445928.1-201ENST00000435545 222 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 AC009963.3-201ENST00000458090 486 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 PFN1P6-201ENST00000476786 399 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.55□□□□□ -1.52
UPK1AO00322 AC090424.1-201ENST00000535243 736 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
UPK1AO00322 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.55□□□□□ -1.52
UPK1AO00322 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.55□□□□□ -1.52
UPK1AO00322 AC091167.5-201ENST00000605689 894 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 AL133481.2-203ENST00000607558 139 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 AP001437.1-201ENST00000608783 456 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPK1AO00322 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 AL591926.1-201ENST00000620542 217 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 AL136228.1-201ENST00000622221 319 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 AC005618.4-201ENST00000625053 554 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 AC104966.1-201ENST00000467010 1464 ntBASIC5.55□□□□□ -1.52
UPK1AO00322 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
UPK1AO00322 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
UPK1AO00322 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
UPK1AO00322 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPK1AO00322 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
UPK1AO00322 AP000473.2-201ENST00000602659 1537 ntBASIC5.54□□□□□ -1.52
UPK1AO00322 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
UPK1AO00322 AC018765.1-201ENST00000623357 3446 ntBASIC5.54□□□□□ -1.52
UPK1AO00322 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms