Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF11Q9Y3C5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 GPX1P1-201ENST00000388829 606 ntBASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF11Q9Y3C5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 AC083906.2-201ENST00000511578 360 ntBASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF11Q9Y3C5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 LETM1P2-201ENST00000597330 2178 ntBASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF11Q9Y3C5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 MIPEPP3-201ENST00000412105 444 ntBASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 AC006970.2-201ENST00000450065 779 ntBASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RNF11Q9Y3C5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF11Q9Y3C5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms