Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CcsQ9WU84 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CcsQ9WU84 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CcsQ9WU84 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CcsQ9WU84 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CcsQ9WU84 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CcsQ9WU84 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.2□□□□□ -0.3
CcsQ9WU84 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.19□□□□□ -0.3
CcsQ9WU84 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CcsQ9WU84 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CcsQ9WU84 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.19□□□□□ -0.3
CcsQ9WU84 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CcsQ9WU84 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.19□□□□□ -0.3
CcsQ9WU84 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.19□□□□□ -0.3
CcsQ9WU84 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.19□□□□□ -0.3
CcsQ9WU84 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CcsQ9WU84 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CcsQ9WU84 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
CcsQ9WU84 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.18□□□□□ -0.3
CcsQ9WU84 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CcsQ9WU84 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.18□□□□□ -0.3
CcsQ9WU84 Gm6365-201ENSMUST00000054711 744 ntBASIC13.18□□□□□ -0.3
CcsQ9WU84 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CcsQ9WU84 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CcsQ9WU84 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CcsQ9WU84 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 Gm6211-202ENSMUST00000167849 925 ntBASIC13.17□□□□□ -0.3
CcsQ9WU84 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CcsQ9WU84 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CcsQ9WU84 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.17□□□□□ -0.3
CcsQ9WU84 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CcsQ9WU84 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CcsQ9WU84 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
CcsQ9WU84 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CcsQ9WU84 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms