Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.65■■□□□ 1.06
ALPK3Q96L96 AC079781.3-201ENST00000449110 356 ntBASIC21.65■■□□□ 1.06
ALPK3Q96L96 UNC93B7-201ENST00000509439 705 ntBASIC21.65■■□□□ 1.06
ALPK3Q96L96 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.65■■□□□ 1.06
ALPK3Q96L96 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.65■■□□□ 1.06
ALPK3Q96L96 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.65■■□□□ 1.06
ALPK3Q96L96 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.65■■□□□ 1.06
ALPK3Q96L96 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALPK3Q96L96 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.65■■□□□ 1.06
ALPK3Q96L96 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALPK3Q96L96 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.65■■□□□ 1.06
ALPK3Q96L96 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALPK3Q96L96 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALPK3Q96L96 TUBB8P6-201ENST00000436895 1288 ntBASIC21.65■■□□□ 1.06
ALPK3Q96L96 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ALPK3Q96L96 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ALPK3Q96L96 MIR3652-201ENST00000579335 131 ntBASIC21.65■■□□□ 1.06
ALPK3Q96L96 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALPK3Q96L96 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
ALPK3Q96L96 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ALPK3Q96L96 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ALPK3Q96L96 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ALPK3Q96L96 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ALPK3Q96L96 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.64■■□□□ 1.05
ALPK3Q96L96 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ALPK3Q96L96 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.64■■□□□ 1.05
ALPK3Q96L96 Z85996.1-201ENST00000494644 937 ntBASIC21.64■■□□□ 1.05
ALPK3Q96L96 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ALPK3Q96L96 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
ALPK3Q96L96 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.64■■□□□ 1.05
ALPK3Q96L96 C1orf229-201ENST00000623686 2258 ntBASIC21.64■■□□□ 1.05
ALPK3Q96L96 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ALPK3Q96L96 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALPK3Q96L96 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.63■■□□□ 1.05
ALPK3Q96L96 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ALPK3Q96L96 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALPK3Q96L96 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALPK3Q96L96 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALPK3Q96L96 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALPK3Q96L96 AL353719.1-201ENST00000566847 864 ntBASIC21.63■■□□□ 1.05
ALPK3Q96L96 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ALPK3Q96L96 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ALPK3Q96L96 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ALPK3Q96L96 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALPK3Q96L96 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.63■■□□□ 1.05
ALPK3Q96L96 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALPK3Q96L96 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.63■■□□□ 1.05
ALPK3Q96L96 AC009078.2-202ENST00000463353 338 ntBASIC21.63■■□□□ 1.05
ALPK3Q96L96 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.63■■□□□ 1.05
ALPK3Q96L96 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.62■■□□□ 1.05
ALPK3Q96L96 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ALPK3Q96L96 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
ALPK3Q96L96 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.62■■□□□ 1.05
ALPK3Q96L96 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.62■■□□□ 1.05
ALPK3Q96L96 HLA-G-202ENST00000376815 851 ntBASIC21.62■■□□□ 1.05
ALPK3Q96L96 HLA-G-203ENST00000376818 1127 ntBASIC21.62■■□□□ 1.05
ALPK3Q96L96 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.62■■□□□ 1.05
ALPK3Q96L96 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.62■■□□□ 1.05
ALPK3Q96L96 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
ALPK3Q96L96 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.62■■□□□ 1.05
ALPK3Q96L96 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.62■■□□□ 1.05
ALPK3Q96L96 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
ALPK3Q96L96 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ALPK3Q96L96 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALPK3Q96L96 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
ALPK3Q96L96 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ALPK3Q96L96 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALPK3Q96L96 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ALPK3Q96L96 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ALPK3Q96L96 HBZP1-201ENST00000354915 429 ntBASIC21.61■■□□□ 1.05
ALPK3Q96L96 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ALPK3Q96L96 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.61■■□□□ 1.05
ALPK3Q96L96 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALPK3Q96L96 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.61■■□□□ 1.05
ALPK3Q96L96 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALPK3Q96L96 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
ALPK3Q96L96 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALPK3Q96L96 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ALPK3Q96L96 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
ALPK3Q96L96 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ALPK3Q96L96 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ALPK3Q96L96 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.61■■□□□ 1.05
ALPK3Q96L96 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.61■■□□□ 1.05
ALPK3Q96L96 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.61■■□□□ 1.05
ALPK3Q96L96 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.6■■□□□ 1.05
ALPK3Q96L96 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.6■■□□□ 1.05
ALPK3Q96L96 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.6■■□□□ 1.05
ALPK3Q96L96 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.6■■□□□ 1.05
ALPK3Q96L96 AL512604.3-201ENST00000569583 964 ntBASIC21.6■■□□□ 1.05
ALPK3Q96L96 AL732292.2-201ENST00000609649 430 ntBASIC21.6■■□□□ 1.05
ALPK3Q96L96 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ALPK3Q96L96 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.6■■□□□ 1.05
ALPK3Q96L96 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALPK3Q96L96 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
ALPK3Q96L96 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALPK3Q96L96 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ALPK3Q96L96 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ALPK3Q96L96 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ALPK3Q96L96 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ALPK3Q96L96 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms