Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC1Q92922 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC1Q92922 KRT126P-201ENST00000549467 1181 ntBASIC25.32■■□□□ 1.64
SMARCC1Q92922 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.32■■□□□ 1.64
SMARCC1Q92922 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC25.32■■□□□ 1.64
SMARCC1Q92922 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
SMARCC1Q92922 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.32■■□□□ 1.64
SMARCC1Q92922 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.32■■□□□ 1.64
SMARCC1Q92922 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC25.32■■□□□ 1.64
SMARCC1Q92922 PHGDH-210ENST00000641115 1638 ntBASIC25.32■■□□□ 1.64
SMARCC1Q92922 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC1Q92922 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC1Q92922 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC1Q92922 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.32■■□□□ 1.64
SMARCC1Q92922 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.31■■□□□ 1.64
SMARCC1Q92922 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC25.31■■□□□ 1.64
SMARCC1Q92922 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 FBXW4P1-201ENST00000426721 2239 ntBASIC25.31■■□□□ 1.64
SMARCC1Q92922 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC25.31■■□□□ 1.64
SMARCC1Q92922 COPS8-203ENST00000409334 794 ntTSL 5 BASIC25.31■■□□□ 1.64
SMARCC1Q92922 CD70-202ENST00000423145 881 ntTSL 2 BASIC25.31■■□□□ 1.64
SMARCC1Q92922 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC25.31■■□□□ 1.64
SMARCC1Q92922 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC25.31■■□□□ 1.64
SMARCC1Q92922 AL023803.3-201ENST00000615559 522 ntBASIC25.31■■□□□ 1.64
SMARCC1Q92922 AL121956.5-201ENST00000625261 221 ntBASIC25.31■■□□□ 1.64
SMARCC1Q92922 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
SMARCC1Q92922 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC1Q92922 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.3■■□□□ 1.64
SMARCC1Q92922 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC1Q92922 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.3■■□□□ 1.64
SMARCC1Q92922 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC1Q92922 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC1Q92922 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC25.3■■□□□ 1.64
SMARCC1Q92922 TSPY17P-201ENST00000450329 467 ntBASIC25.3■■□□□ 1.64
SMARCC1Q92922 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC25.3■■□□□ 1.64
SMARCC1Q92922 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC25.3■■□□□ 1.64
SMARCC1Q92922 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC25.3■■□□□ 1.64
SMARCC1Q92922 AL512604.3-201ENST00000569583 964 ntBASIC25.3■■□□□ 1.64
SMARCC1Q92922 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC25.3■■□□□ 1.64
SMARCC1Q92922 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC25.3■■□□□ 1.64
SMARCC1Q92922 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC25.3■■□□□ 1.64
SMARCC1Q92922 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC25.3■■□□□ 1.64
SMARCC1Q92922 AL031432.5-201ENST00000641059 760 ntBASIC25.3■■□□□ 1.64
SMARCC1Q92922 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
SMARCC1Q92922 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC1Q92922 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SMARCC1Q92922 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
SMARCC1Q92922 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SMARCC1Q92922 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
SMARCC1Q92922 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMARCC1Q92922 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC25.29■■□□□ 1.64
SMARCC1Q92922 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC25.29■■□□□ 1.64
SMARCC1Q92922 AC011558.1-201ENST00000623459 338 ntBASIC25.29■■□□□ 1.64
SMARCC1Q92922 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SMARCC1Q92922 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SMARCC1Q92922 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SMARCC1Q92922 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC25.28■■□□□ 1.64
SMARCC1Q92922 FP700111.2-201ENST00000619190 1892 ntBASIC25.28■■□□□ 1.64
SMARCC1Q92922 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
SMARCC1Q92922 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
SMARCC1Q92922 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
SMARCC1Q92922 GXYLT1P6-201ENST00000456472 1187 ntBASIC25.28■■□□□ 1.64
SMARCC1Q92922 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC25.28■■□□□ 1.64
SMARCC1Q92922 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMARCC1Q92922 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMARCC1Q92922 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SMARCC1Q92922 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SMARCC1Q92922 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMARCC1Q92922 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMARCC1Q92922 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SMARCC1Q92922 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.27■■□□□ 1.64
SMARCC1Q92922 ANKRD20A18P-201ENST00000359341 492 ntBASIC25.27■■□□□ 1.64
SMARCC1Q92922 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SMARCC1Q92922 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
SMARCC1Q92922 PCED1CP-201ENST00000419887 785 ntBASIC25.27■■□□□ 1.64
SMARCC1Q92922 HOMER2P1-201ENST00000455653 964 ntBASIC25.27■■□□□ 1.64
SMARCC1Q92922 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMARCC1Q92922 FAM86EP-206ENST00000510506 987 ntBASIC25.27■■□□□ 1.64
SMARCC1Q92922 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC25.27■■□□□ 1.64
SMARCC1Q92922 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.27■■□□□ 1.64
SMARCC1Q92922 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
SMARCC1Q92922 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC25.27■■□□□ 1.64
SMARCC1Q92922 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMARCC1Q92922 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMARCC1Q92922 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMARCC1Q92922 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMARCC1Q92922 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMARCC1Q92922 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC25.26■■□□□ 1.63
SMARCC1Q92922 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms