Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.9■■□□□ 1.58
COL23A1Q86Y22 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC24.9■■□□□ 1.58
COL23A1Q86Y22 AL121603.2-201ENST00000557373 2117 ntBASIC24.9■■□□□ 1.58
COL23A1Q86Y22 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC24.9■■□□□ 1.58
COL23A1Q86Y22 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.9■■□□□ 1.58
COL23A1Q86Y22 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL23A1Q86Y22 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 AC121338.2-201ENST00000622535 1744 ntBASIC24.89■■□□□ 1.58
COL23A1Q86Y22 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 AL512604.3-201ENST00000569583 964 ntBASIC24.89■■□□□ 1.58
COL23A1Q86Y22 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC24.89■■□□□ 1.58
COL23A1Q86Y22 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL23A1Q86Y22 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL23A1Q86Y22 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
COL23A1Q86Y22 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.89■■□□□ 1.57
COL23A1Q86Y22 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL23A1Q86Y22 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
COL23A1Q86Y22 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 ATP5G2P1-201ENST00000433580 426 ntBASIC24.88■■□□□ 1.57
COL23A1Q86Y22 FDX1P1-201ENST00000449115 551 ntBASIC24.88■■□□□ 1.57
COL23A1Q86Y22 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 AC083849.1-201ENST00000615227 514 ntBASIC24.88■■□□□ 1.57
COL23A1Q86Y22 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL23A1Q86Y22 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 Z85996.1-201ENST00000494644 937 ntBASIC24.87■■□□□ 1.57
COL23A1Q86Y22 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
COL23A1Q86Y22 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL23A1Q86Y22 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.86■■□□□ 1.57
COL23A1Q86Y22 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL23A1Q86Y22 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL23A1Q86Y22 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL23A1Q86Y22 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL23A1Q86Y22 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL23A1Q86Y22 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.86■■□□□ 1.57
COL23A1Q86Y22 HYMAI.1-201ENST00000620949 238 ntBASIC24.86■■□□□ 1.57
COL23A1Q86Y22 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL23A1Q86Y22 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL23A1Q86Y22 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 AC112907.2-201ENST00000448639 330 ntBASIC24.85■■□□□ 1.57
COL23A1Q86Y22 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 ZNF444P1-201ENST00000559497 298 ntBASIC24.85■■□□□ 1.57
COL23A1Q86Y22 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL23A1Q86Y22 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL23A1Q86Y22 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
COL23A1Q86Y22 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.84■■□□□ 1.57
COL23A1Q86Y22 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
COL23A1Q86Y22 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
COL23A1Q86Y22 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL23A1Q86Y22 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC24.84■■□□□ 1.57
COL23A1Q86Y22 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC24.84■■□□□ 1.57
COL23A1Q86Y22 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms