Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HTR3AP46098 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.18■□□□□ 0.5
HTR3AP46098 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3AP46098 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HTR3AP46098 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3AP46098 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
HTR3AP46098 AL109923.1-201ENST00000618799 583 ntBASIC18.18■□□□□ 0.5
HTR3AP46098 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3AP46098 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
HTR3AP46098 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3AP46098 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.18■□□□□ 0.5
HTR3AP46098 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3AP46098 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
HTR3AP46098 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3AP46098 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.18■□□□□ 0.5
HTR3AP46098 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HTR3AP46098 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HTR3AP46098 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 DUSP5P2-201ENST00000426873 1033 ntBASIC18.17■□□□□ 0.5
HTR3AP46098 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
HTR3AP46098 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.17■□□□□ 0.5
HTR3AP46098 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
HTR3AP46098 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.17■□□□□ 0.5
HTR3AP46098 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.17■□□□□ 0.5
HTR3AP46098 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.17■□□□□ 0.5
HTR3AP46098 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.17■□□□□ 0.5
HTR3AP46098 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.17■□□□□ 0.5
HTR3AP46098 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HTR3AP46098 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HTR3AP46098 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.17■□□□□ 0.5
HTR3AP46098 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HTR3AP46098 AC112907.3-201ENST00000577781 2400 ntBASIC18.17■□□□□ 0.5
HTR3AP46098 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
HTR3AP46098 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HTR3AP46098 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HTR3AP46098 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.16■□□□□ 0.5
HTR3AP46098 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTR3AP46098 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTR3AP46098 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTR3AP46098 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTR3AP46098 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTR3AP46098 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HTR3AP46098 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.16■□□□□ 0.5
HTR3AP46098 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HTR3AP46098 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HTR3AP46098 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.16■□□□□ 0.5
HTR3AP46098 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HTR3AP46098 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.16■□□□□ 0.5
HTR3AP46098 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.16■□□□□ 0.5
HTR3AP46098 AC005082.1-201ENST00000413042 2259 ntBASIC18.16■□□□□ 0.5
HTR3AP46098 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.15■□□□□ 0.5
HTR3AP46098 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR3AP46098 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR3AP46098 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR3AP46098 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR3AP46098 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR3AP46098 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR3AP46098 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HTR3AP46098 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.15■□□□□ 0.5
HTR3AP46098 AC073210.2-201ENST00000430369 194 ntBASIC18.15■□□□□ 0.5
HTR3AP46098 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.15■□□□□ 0.5
HTR3AP46098 AC097658.1-201ENST00000475555 843 ntBASIC18.15■□□□□ 0.5
HTR3AP46098 AC091874.3-201ENST00000512672 1195 ntBASIC18.15■□□□□ 0.5
HTR3AP46098 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.15■□□□□ 0.5
HTR3AP46098 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.15■□□□□ 0.5
HTR3AP46098 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.15■□□□□ 0.5
HTR3AP46098 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.15■□□□□ 0.5
HTR3AP46098 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.15■□□□□ 0.5
HTR3AP46098 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR3AP46098 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR3AP46098 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR3AP46098 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HTR3AP46098 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR3AP46098 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR3AP46098 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.15■□□□□ 0.5
HTR3AP46098 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.14■□□□□ 0.49
HTR3AP46098 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR3AP46098 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.14■□□□□ 0.49
HTR3AP46098 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.14■□□□□ 0.49
HTR3AP46098 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.14■□□□□ 0.49
HTR3AP46098 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.14■□□□□ 0.49
HTR3AP46098 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.14■□□□□ 0.49
HTR3AP46098 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.14■□□□□ 0.49
HTR3AP46098 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.14■□□□□ 0.49
HTR3AP46098 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR3AP46098 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HTR3AP46098 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms