Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.17■□□□□ 0.66
PCNAP12004 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCNAP12004 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCNAP12004 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.17■□□□□ 0.66
PCNAP12004 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCNAP12004 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCNAP12004 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCNAP12004 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCNAP12004 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCNAP12004 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.16■□□□□ 0.66
PCNAP12004 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.16■□□□□ 0.66
PCNAP12004 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.16■□□□□ 0.66
PCNAP12004 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCNAP12004 GUSBP6-202ENST00000438529 1198 ntBASIC19.16■□□□□ 0.66
PCNAP12004 AC090192.1-201ENST00000517740 490 ntBASIC19.16■□□□□ 0.66
PCNAP12004 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.16■□□□□ 0.66
PCNAP12004 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.16■□□□□ 0.66
PCNAP12004 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.16■□□□□ 0.66
PCNAP12004 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCNAP12004 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
PCNAP12004 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.16■□□□□ 0.66
PCNAP12004 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.16■□□□□ 0.66
PCNAP12004 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.16■□□□□ 0.66
PCNAP12004 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCNAP12004 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCNAP12004 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.16■□□□□ 0.66
PCNAP12004 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCNAP12004 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCNAP12004 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.15■□□□□ 0.66
PCNAP12004 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCNAP12004 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCNAP12004 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCNAP12004 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCNAP12004 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCNAP12004 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.15■□□□□ 0.66
PCNAP12004 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCNAP12004 AC023632.3-201ENST00000521633 145 ntBASIC19.15■□□□□ 0.66
PCNAP12004 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.15■□□□□ 0.66
PCNAP12004 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.15■□□□□ 0.66
PCNAP12004 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCNAP12004 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCNAP12004 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.15■□□□□ 0.66
PCNAP12004 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCNAP12004 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
PCNAP12004 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.14■□□□□ 0.66
PCNAP12004 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCNAP12004 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PCNAP12004 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCNAP12004 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCNAP12004 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCNAP12004 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCNAP12004 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PCNAP12004 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PCNAP12004 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.14■□□□□ 0.65
PCNAP12004 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.14■□□□□ 0.65
PCNAP12004 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.14■□□□□ 0.65
PCNAP12004 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.14■□□□□ 0.65
PCNAP12004 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.14■□□□□ 0.65
PCNAP12004 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PCNAP12004 AC092118.2-201ENST00000613495 667 ntBASIC19.14■□□□□ 0.65
PCNAP12004 AL109923.1-201ENST00000618799 583 ntBASIC19.14■□□□□ 0.65
PCNAP12004 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCNAP12004 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
PCNAP12004 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCNAP12004 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PCNAP12004 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.14■□□□□ 0.65
PCNAP12004 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCNAP12004 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCNAP12004 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCNAP12004 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNAP12004 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNAP12004 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNAP12004 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNAP12004 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNAP12004 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
PCNAP12004 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCNAP12004 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCNAP12004 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.13■□□□□ 0.65
PCNAP12004 MIR4758-201ENST00000577688 71 ntBASIC19.13■□□□□ 0.65
PCNAP12004 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.13■□□□□ 0.65
PCNAP12004 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.13■□□□□ 0.65
PCNAP12004 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCNAP12004 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.13■□□□□ 0.65
PCNAP12004 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCNAP12004 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms