Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
A0A1W2PRF3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
A0A1W2PRF3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
A0A1W2PRF3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
A0A1W2PRF3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
A0A1W2PRF3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
A0A1W2PRF3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
A0A1W2PRF3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
A0A1W2PRF3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
A0A1W2PRF3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
A0A1W2PRF3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
A0A1W2PRF3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 AP005212.1-201ENST00000581547 1997 ntBASIC16.2■□□□□ 0.18
A0A1W2PRF3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
A0A1W2PRF3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.2■□□□□ 0.18
A0A1W2PRF3 KRT16P6-202ENST00000425692 1426 ntBASIC16.19■□□□□ 0.18
A0A1W2PRF3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
A0A1W2PRF3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
A0A1W2PRF3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
A0A1W2PRF3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
A0A1W2PRF3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
A0A1W2PRF3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
A0A1W2PRF3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
A0A1W2PRF3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
A0A1W2PRF3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
A0A1W2PRF3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
A0A1W2PRF3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
A0A1W2PRF3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.19■□□□□ 0.18
A0A1W2PRF3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.18■□□□□ 0.18
A0A1W2PRF3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.18■□□□□ 0.18
A0A1W2PRF3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.18■□□□□ 0.18
A0A1W2PRF3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.18■□□□□ 0.18
A0A1W2PRF3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
A0A1W2PRF3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
A0A1W2PRF3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
A0A1W2PRF3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
A0A1W2PRF3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
A0A1W2PRF3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms