Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TPM3P3-201ENST00000521343 354 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AC138832.1-201ENST00000522871 556 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 OR4A43P-201ENST00000532938 908 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AC092332.1-201ENST00000563684 829 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 OR1E3-201ENST00000575608 948 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 MIR132-201ENST00000591554 101 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AC009779.8-202ENST00000607990 932 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AC092681.3-201ENST00000609463 678 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AC096861.1-201ENST00000616652 240 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AP001052.1-201ENST00000626421 99 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 AL596275.2-207ENST00000641188 675 ntBASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRAPPC4Q9Y296 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 RNU1-134P-201ENST00000362935 165 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 RN7SKP171-201ENST00000364417 303 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 SEPT7P2-202ENST00000398921 823 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 RN7SKP166-201ENST00000410812 305 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AL096829.1-201ENST00000413677 457 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AL512593.1-201ENST00000444758 779 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AC097463.1-201ENST00000447288 481 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 PPIAP7-201ENST00000454070 489 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AC021006.1-201ENST00000489849 553 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AC105420.1-201ENST00000504389 582 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 OR7E99P-201ENST00000505750 922 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 TOMM22P4-201ENST00000511318 336 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 CR383658.1-201ENST00000514609 734 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 HSD3BP3-201ENST00000514706 994 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 OR56A7P-201ENST00000524865 941 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AP000620.1-201ENST00000527147 504 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 MRPS21P8-201ENST00000569196 235 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AC027216.1-201ENST00000577726 685 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AC119403.2-201ENST00000590960 598 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 MIR6806-201ENST00000622141 64 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AC016583.1-201ENST00000624221 2431 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 AC018717.1-201ENST00000457712 1505 ntBASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRAPPC4Q9Y296 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 RN7SKP128-201ENST00000364270 303 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 RN7SKP69-201ENST00000365390 305 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 RNA5SP279-201ENST00000365513 117 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 MTND2P40-201ENST00000436718 841 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms