Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 RPS16P9-201ENST00000477220 427 ntBASIC10.28□□□□□ -0.76
PHF8Q9UPP1 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AC008496.1-201ENST00000509131 295 ntBASIC10.28□□□□□ -0.76
PHF8Q9UPP1 FGF7P4-201ENST00000509595 295 ntBASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 RPS20-202ENST00000518875 671 ntTSL 2 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AC090515.3-201ENST00000560431 315 ntBASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AL078623.1-201ENST00000602702 907 ntBASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AC005021.1-201ENST00000608730 355 ntBASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 uc_338.21-201ENST00000622458 147 ntBASIC10.28□□□□□ -0.76
PHF8Q9UPP1 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 SNORA43.5-201ENST00000631270 138 ntBASIC10.28□□□□□ -0.76
PHF8Q9UPP1 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 MAP3K19-202ENST00000375844 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
PHF8Q9UPP1 AL669831.5-218ENST00000591702 1873 ntBASIC10.27□□□□□ -0.76
PHF8Q9UPP1 MAGEE2-201ENST00000373359 2249 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
PHF8Q9UPP1 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PHF8Q9UPP1 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PHF8Q9UPP1 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
PHF8Q9UPP1 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
PHF8Q9UPP1 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 ANKRD20A5P-201ENST00000431648 3556 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 RNU4-79P-201ENST00000362764 141 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 RNU6-907P-201ENST00000390924 102 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 RNU1-56P-201ENST00000391303 164 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 MTND3P17-201ENST00000416968 344 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 PIP5K1P2-201ENST00000437005 1120 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 RPS4XP4-201ENST00000443195 763 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 RHEBP1-201ENST00000448647 556 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AC093799.1-201ENST00000452411 499 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 SRP68P2-201ENST00000456184 254 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AC009153.1-201ENST00000485799 496 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 RN7SL655P-201ENST00000486087 298 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 OR7E163P-201ENST00000505943 894 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AF235103.2-201ENST00000525753 346 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 OR7K1P-201ENST00000546439 926 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AC138207.8-204ENST00000579588 527 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AL451085.1-201ENST00000604546 690 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AC098614.4-201ENST00000607601 462 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 TRIM53BP-201ENST00000532912 1720 ntBASIC10.27□□□□□ -0.77
PHF8Q9UPP1 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PHF8Q9UPP1 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC10.26□□□□□ -0.77
PHF8Q9UPP1 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PHF8Q9UPP1 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PHF8Q9UPP1 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PHF8Q9UPP1 ST5-237ENST00000530991 3396 ntTSL 2 BASIC10.26□□□□□ -0.77
PHF8Q9UPP1 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PHF8Q9UPP1 PABPC1P9-201ENST00000426076 1612 ntBASIC10.26□□□□□ -0.77
PHF8Q9UPP1 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PHF8Q9UPP1 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PHF8Q9UPP1 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms