Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AP003486.1-201ENST00000525716 3994 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 RPS3AP5-201ENST00000389400 821 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC092634.2-201ENST00000428146 1010 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC005189.1-201ENST00000431286 310 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AK3P5-201ENST00000432033 519 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 USP9YP24-201ENST00000434374 697 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC245452.2-201ENST00000435222 392 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 H3F3BP1-201ENST00000440551 403 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 HMGN1P32-201ENST00000441744 256 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 WDR82P2-201ENST00000444540 928 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 USP9YP17-201ENST00000444617 696 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 MTATP6P26-201ENST00000445926 662 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 MTCYBP11-201ENST00000447254 1109 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 Z95152.1-201ENST00000453556 656 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC004890.1-201ENST00000461005 181 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 RN7SL168P-201ENST00000463821 279 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 RN7SL149P-201ENST00000465197 281 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC092824.1-201ENST00000483524 576 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC079594.1-201ENST00000489757 331 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC025459.1-201ENST00000504072 156 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC093534.1-201ENST00000504977 132 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 BTG4P1-201ENST00000510421 183 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 IGHV3-57-201ENST00000520143 280 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 MIR4800-201ENST00000537353 80 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC008126.1-201ENST00000549019 480 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AL049870.4-201ENST00000555741 486 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC025811.1-201ENST00000604312 472 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC106052.1-201ENST00000608029 497 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC097065.2-201ENST00000608159 533 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC015819.1-201ENST00000613588 663 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC005393.1-201ENST00000617916 584 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 AC211433.3-201ENST00000623770 375 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 CR788268.1-201ENST00000603931 1809 ntBASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.4□□□□□ -1.39
CCM2LQ9NUG4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.4□□□□□ -1.39
CCM2LQ9NUG4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.4□□□□□ -1.39
CCM2LQ9NUG4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CCM2LQ9NUG4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCM2LQ9NUG4 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCM2LQ9NUG4 AC005225.5-201ENST00000623547 2225 ntBASIC6.4□□□□□ -1.39
CCM2LQ9NUG4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 AL132640.2-201ENST00000559968 1698 ntBASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 AC009220.2-201ENST00000489759 1751 ntBASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 UBTFL2-201ENST00000411859 1191 ntBASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 VPS26BP1-201ENST00000417155 755 ntBASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 MTND2P16-201ENST00000419987 799 ntBASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 AL139415.1-201ENST00000424862 352 ntBASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 OSTCP5-201ENST00000425293 453 ntBASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 AC134879.1-201ENST00000426062 394 ntBASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 AC093716.1-201ENST00000435923 377 ntBASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.39□□□□□ -1.39
CCM2LQ9NUG4 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms