Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC6.25□□□□□ -1.41
SIX2Q9NPC8 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 CASC19-238ENST00000641523 1558 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 TMSB4XP2-201ENST00000335179 210 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 RNU1-150P-201ENST00000362491 162 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 RNU1-65P-201ENST00000363919 148 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AL357752.1-201ENST00000412817 349 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 MRPL53P1-201ENST00000414323 319 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 NDUFS5P5-201ENST00000437256 321 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AMYP1-201ENST00000440059 1023 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 LSM3P4-201ENST00000502948 309 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 MRPS21P9-201ENST00000571150 257 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AC022919.1-201ENST00000624979 626 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AC087516.1-201ENST00000561236 2428 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 AC004076.2-201ENST00000620532 3323 ntBASIC6.24□□□□□ -1.41
SIX2Q9NPC8 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 RPS2P45-201ENST00000469997 2057 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 RNA5SP477-201ENST00000362639 119 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 SMC4P1-201ENST00000414479 527 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 DEFA9P-201ENST00000433042 285 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 Z83838.1-202ENST00000456225 839 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AC068228.1-201ENST00000461723 211 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AC021146.10-201ENST00000515628 706 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 PCNAP4-201ENST00000532690 730 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AC026826.3-201ENST00000561747 158 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AC096996.1-201ENST00000563813 325 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 ZNF322P1-201ENST00000568013 1209 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 RPL12P48-201ENST00000605620 304 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AC010480.1-201ENST00000624823 684 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AL596275.2-207ENST00000641188 675 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AL669831.5-218ENST00000591702 1873 ntBASIC6.23□□□□□ -1.41
SIX2Q9NPC8 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SIX2Q9NPC8 AC123769.1-201ENST00000530992 3192 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms