Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 MIR551B-201ENST00000384984 96 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 RNA5SP105-201ENST00000391123 113 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AL157702.1-201ENST00000398764 426 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AL121977.1-201ENST00000401636 979 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 MTND4LP7-201ENST00000431728 294 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AC046176.1-201ENST00000435260 1170 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 MTND4P15-201ENST00000437913 1033 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 CXCR2P1-202ENST00000443392 1074 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 VN1R48P-201ENST00000448149 1036 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 HIGD1AP16-201ENST00000450986 258 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 RBMY2HP-201ENST00000457961 720 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 OR11I1P-201ENST00000486033 954 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 RWDD4P1-201ENST00000488019 565 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AC090543.1-201ENST00000492168 485 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AC008945.1-201ENST00000505144 499 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 RN7SKP67-201ENST00000515905 235 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AC113191.1-201ENST00000517759 403 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 HMGN1P26-201ENST00000558737 303 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 CCDC58P1-201ENST00000578567 430 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AC005726.4-201ENST00000582858 458 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 GLYATL1P2-202ENST00000588046 902 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 AC004890.3-201ENST00000605566 1095 ntBASIC5.93□□□□□ -1.46
BRF2Q9HAW0 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.93□□□□□ -1.46
BRF2Q9HAW0 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC107021.2-201ENST00000567714 2095 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AL133260.1-201ENST00000405720 405 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AL139805.1-201ENST00000407837 289 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC094019.1-201ENST00000434678 472 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 RPS19P6-201ENST00000441327 433 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AP002345.1-201ENST00000456493 928 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 MRPL57P6-201ENST00000506570 309 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 CASP1P2-201ENST00000526830 1258 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 OR4A6P-201ENST00000534364 970 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC092865.1-201ENST00000544395 1023 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC023310.2-201ENST00000553844 547 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.92□□□□□ -1.46
BRF2Q9HAW0 LINC00557-201ENST00000563184 1279 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 SNORD39.2-201ENST00000579995 76 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC063977.7-201ENST00000594454 337 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AP004372.1-201ENST00000604842 844 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC007423.1-201ENST00000605009 627 ntBASIC5.92□□□□□ -1.46
BRF2Q9HAW0 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms