Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 MIR122-201ENST00000385044 85 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AL606495.1-201ENST00000422100 813 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC092106.2-201ENST00000436597 487 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC083855.1-201ENST00000440041 258 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 COL11A2P1-205ENST00000441798 676 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 RPL31P11-202ENST00000454082 372 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 RPL32P14-201ENST00000463196 378 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 RPS7P11-201ENST00000484240 586 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC093870.1-201ENST00000506837 213 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 OR4A17P-201ENST00000526032 904 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC026956.1-201ENST00000558741 396 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC027796.1-201ENST00000575593 512 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 RN7SL339P-201ENST00000580597 296 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC090616.1-201ENST00000583895 447 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 RPL29P33-201ENST00000587474 316 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 CLUHP10-201ENST00000631979 980 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 OFD1P17-201ENST00000437639 3018 ntBASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM54Q9BYV2 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 LCN1P2-201ENST00000372030 223 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AC092106.1-201ENST00000444291 373 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 MTND6P5-201ENST00000448266 512 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 RPL23AP23-201ENST00000452590 471 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 RN7SL790P-201ENST00000474043 298 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 RN7SL502P-201ENST00000481857 290 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 RN7SL413P-201ENST00000482700 297 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 GTF2IP9-201ENST00000502460 301 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AC122714.1-201ENST00000502510 459 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 HMGN1P17-201ENST00000513734 295 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 RNU5A-7P-201ENST00000515979 116 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AC073916.1-201ENST00000545095 130 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AC233702.7-202ENST00000582941 211 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AC004805.3-201ENST00000603178 310 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 U91328.4-201ENST00000608919 517 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AC063944.3-201ENST00000609969 533 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AC008759.3-201ENST00000613300 508 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 MIR6849-201ENST00000618543 69 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AC090617.9-201ENST00000623751 147 ntBASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM54Q9BYV2 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms