Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 RPL22P22-201ENST00000395439 379 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 RNA5SP198-201ENST00000410376 127 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 TMA16P2-201ENST00000413187 601 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 HIGD1AP15-201ENST00000416198 280 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 XKRYP1-201ENST00000423438 492 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AL157884.1-201ENST00000424561 454 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AL139158.1-201ENST00000424719 340 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC244033.1-201ENST00000426826 870 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 BX119904.3-201ENST00000428194 957 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AL589823.1-201ENST00000429577 183 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 XKRYP2-201ENST00000432915 492 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 MED6P1-201ENST00000439659 713 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 MTCYBP21-201ENST00000443300 1113 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 SEPT7P6-201ENST00000469999 1143 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 RN7SL643P-201ENST00000471845 291 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC087672.1-201ENST00000479876 766 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 RN7SL741P-201ENST00000482473 289 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 RN7SL362P-201ENST00000494228 267 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 HMGN1P16-201ENST00000508308 283 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 IGKV1D-22-201ENST00000518953 324 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 OSBPL9P5-201ENST00000542581 171 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC084824.2-201ENST00000548906 345 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC125611.1-201ENST00000549563 229 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC022387.2-201ENST00000604050 448 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AC108673.3-201ENST00000609183 335 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 MIR6780B-201ENST00000610307 79 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 MIR7109-201ENST00000613748 65 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 AL357153.4-201ENST00000620487 1016 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 MRPL57P1-201ENST00000621486 265 ntBASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDK5RAP1Q96SZ6 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
CDK5RAP1Q96SZ6 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CDK5RAP1Q96SZ6 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
CDK5RAP1Q96SZ6 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CDK5RAP1Q96SZ6 PPBPP2-201ENST00000513150 1362 ntBASIC6.71□□□□□ -1.33
CDK5RAP1Q96SZ6 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.71□□□□□ -1.33
CDK5RAP1Q96SZ6 AC005332.9-201ENST00000620266 2921 ntBASIC6.71□□□□□ -1.33
CDK5RAP1Q96SZ6 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 ZNF29P-201ENST00000225587 168 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 FAM32BP-201ENST00000344033 333 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 RNA5SP77-201ENST00000365394 120 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AL139805.1-201ENST00000407837 289 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 RN7SKP281-201ENST00000410472 352 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 MTND2P20-201ENST00000440805 661 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 COX4I1P2-201ENST00000447446 547 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC093166.3-201ENST00000448785 303 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 GM2AP2-201ENST00000491764 562 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 KHDC1P1-201ENST00000511053 508 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 IGHV4-55-201ENST00000520889 368 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC087894.1-201ENST00000538359 518 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 AC012213.3-201ENST00000577199 777 ntBASIC6.71□□□□□ -1.34
CDK5RAP1Q96SZ6 MIR3154-201ENST00000577829 84 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms