Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC010894.1-201ENST00000313760 361 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 RNU6-249P-201ENST00000363016 102 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 RN7SKP205-201ENST00000410999 307 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 COL11A2P1-205ENST00000441798 676 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 ABCC13-202ENST00000463099 3842 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 RPS3AP49-201ENST00000472161 790 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 RPL23AP40-201ENST00000487630 390 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC244502.2-201ENST00000543361 851 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC133552.4-201ENST00000576103 676 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 RPL7AP69-201ENST00000595306 806 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AL137000.1-201ENST00000610528 1244 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC005618.4-201ENST00000625053 554 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AL158152.1-201ENST00000602652 1435 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.44□□□□□ -1.7
AP1S3Q96PC3 AC019072.1-201ENST00000604535 1551 ntBASIC4.44□□□□□ -1.7
AP1S3Q96PC3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 RNA5SP279-201ENST00000365513 117 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 RPL11P3-201ENST00000395256 523 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 OOSP1-201ENST00000398992 1270 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 RN7SKP117-201ENST00000410175 264 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AL161742.1-201ENST00000418154 584 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 PPIAP23-201ENST00000420099 497 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 FTLP19-201ENST00000433300 394 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AL592114.2-201ENST00000440142 532 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 TCEA1P3-201ENST00000443005 880 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 CUBNP2-201ENST00000443534 1139 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AL845321.1-201ENST00000444603 348 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 GAPDHP23-201ENST00000444823 993 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC005165.2-201ENST00000466070 380 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AL079303.1-201ENST00000486611 463 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 EIF3LP3-201ENST00000495197 822 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 IGHVII-49-1-201ENST00000521760 224 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 SETP1-201ENST00000556014 845 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AL589743.6-201ENST00000611025 117 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC010998.3-201ENST00000613871 631 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AL121985.3-201ENST00000620690 523 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC103564.3-201ENST00000621194 220 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 MIR6807-201ENST00000621968 92 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC005355.2-201ENST00000625064 484 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 AC006453.3-201ENST00000635891 377 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 THAP12P9-201ENST00000503971 2360 ntBASIC4.43□□□□□ -1.7
AP1S3Q96PC3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP1S3Q96PC3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms