Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 GLS-203ENST00000409215 632 ntTSL 4 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 TMA16P2-201ENST00000413187 601 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 RPL7AP51-201ENST00000422016 760 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 VN1R20P-201ENST00000425215 966 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 RPS7P14-201ENST00000426405 583 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AC094019.1-201ENST00000434678 472 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 PPIAP10-201ENST00000438675 458 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AP001000.1-201ENST00000526843 742 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 NPIPB14P-203ENST00000532298 987 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 WBP1LP12-201ENST00000604449 331 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 LINC00216-201ENST00000623548 1126 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AC003992.1-201ENST00000635364 557 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AL137141.1-201ENST00000624622 4836 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AC110373.1-201ENST00000505994 3505 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AC034229.2-201ENST00000566945 2508 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 DPY19L1P1-201ENST00000417811 2594 ntBASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CDK5RAP3Q96JB5 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 Z83820.1-201ENST00000456978 1499 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 RNU1-49P-201ENST00000363468 159 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 RNU6-1331P-201ENST00000363658 106 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 SNORA43.1-201ENST00000364863 140 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AC098592.2-201ENST00000413158 265 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 HMGA1P8-201ENST00000414130 321 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 GTF3AP1-201ENST00000416942 1004 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 BMP6P1-201ENST00000431230 679 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 RPSAP32-201ENST00000432681 526 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 GXYLT1P1-201ENST00000446657 490 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AC097359.1-201ENST00000447946 463 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 RPS27AP3-201ENST00000453803 454 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 HMGN1P16-201ENST00000508308 283 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 Y_RNA.710-201ENST00000516975 110 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AC005000.1-201ENST00000536192 288 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 NPIPB1P-202ENST00000588786 828 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 RPSAP75-201ENST00000605848 301 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AC096921.2-201ENST00000561507 1916 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 AC092692.1-201ENST00000623625 2595 ntBASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CDK5RAP3Q96JB5 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 HDAC1P2-201ENST00000453661 1398 ntBASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.98□□□□□ -1.29
CDK5RAP3Q96JB5 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms