Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.96□□□□□ -1.46
ECHDC3Q96DC8 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 AL590399.4-201ENST00000436561 601 ntBASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 AC011476.1-201ENST00000466725 307 ntBASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 RPL12P24-201ENST00000474907 486 ntBASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 AC114781.3-201ENST00000512083 142 ntBASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 AC006530.1-201ENST00000555980 571 ntBASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 COX6CP7-201ENST00000597056 208 ntBASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 MIR6861-201ENST00000618657 64 ntBASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 AC018659.2-201ENST00000624690 715 ntBASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 AC073365.1-203ENST00000641055 1992 ntBASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
ECHDC3Q96DC8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 AC079753.1-201ENST00000623243 3868 ntBASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 AC023490.2-201ENST00000359859 470 ntBASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 VN1R3-201ENST00000418822 919 ntBASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 BX323845.3-201ENST00000428215 527 ntBASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 AL663074.2-201ENST00000440621 479 ntBASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 SLC25A51P1-201ENST00000468432 871 ntBASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 RPL38P3-201ENST00000484463 213 ntBASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 TXNP4-201ENST00000575018 310 ntBASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 RPL12P48-201ENST00000605620 304 ntBASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 AL139099.4-201ENST00000614802 114 ntBASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 AL445670.1-201ENST00000618889 801 ntBASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ECHDC3Q96DC8 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 PDZK1P1-202ENST00000425209 1350 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms