Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AP000641.1-201ENST00000531988 1639 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 RPL24P4-201ENST00000326586 421 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 PPIAP24-201ENST00000328558 471 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 U3.52-201ENST00000384034 216 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 MIR199B-201ENST00000384849 110 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 ETF1P3-201ENST00000430422 1160 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 RPSAP32-201ENST00000432681 526 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 TRY2P-201ENST00000448860 689 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AL451063.1-201ENST00000450164 1133 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 CCNJP1-201ENST00000450600 1149 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 RN7SL568P-201ENST00000493069 298 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AC093664.1-201ENST00000511779 289 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 DPPA3P2-201ENST00000553589 478 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 MT1CP-201ENST00000567054 174 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 MRPS21P9-201ENST00000571150 257 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 RN7SL199P-201ENST00000578752 281 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 RN7SL656P-201ENST00000579044 281 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 RN7SL270P-201ENST00000579643 281 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 SNORD39.2-201ENST00000579995 76 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 RN7SL404P-201ENST00000582421 281 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 ZNF849P-201ENST00000594711 1566 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AP002906.1-201ENST00000603405 233 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 U1.34-201ENST00000618578 162 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AP002791.1-201ENST00000623291 381 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 RPSAP68-201ENST00000625020 438 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 AC139713.2-210ENST00000641741 992 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 Z97989.1-201ENST00000531702 2421 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 DDX18P6-201ENST00000450119 1997 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 PPBPP2-201ENST00000513150 1362 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 SPATA2P1-201ENST00000431223 2055 ntBASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
FNDC3BQ53EP0 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 MTCO1P18-201ENST00000455518 1419 ntBASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 RN7SKP171-201ENST00000364417 303 ntBASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 MIR1204-201ENST00000408388 67 ntBASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 RN7SKP129-201ENST00000410288 299 ntBASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 AC023128.2-201ENST00000420880 1223 ntBASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.79□□□□□ -1.32
FNDC3BQ53EP0 VDAC1P2-201ENST00000423609 850 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms