Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 RNU6-489P-201ENST00000618289 107 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AL354718.1-201ENST00000619764 589 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC099654.8-201ENST00000637757 681 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
CCDC144BQ3MJ40 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.59□□□□□ -1.2
CCDC144BQ3MJ40 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 PSMC1P6-201ENST00000477233 1319 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 RN7SKP237-201ENST00000364663 301 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 RN7SKP15-201ENST00000364742 309 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 SNORA70.3-201ENST00000365075 132 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 RNA5SP77-201ENST00000365394 120 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 RNA5SP431-201ENST00000410312 120 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 RANP6-201ENST00000413691 644 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 GAPDHP59-201ENST00000435908 267 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 HMGB1P26-201ENST00000452520 628 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC016724.1-201ENST00000453215 421 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 RN7SL39P-201ENST00000462264 297 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 CYCSP20-201ENST00000473154 315 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 RPL12P24-201ENST00000474907 486 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC118282.1-201ENST00000506408 765 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 OR52H2P-201ENST00000514607 902 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 SNORA74.1-201ENST00000516320 180 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC092718.4-201ENST00000566639 716 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 DYNLL1P1-201ENST00000595442 269 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC011497.2-201ENST00000600255 639 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC084373.1-201ENST00000603311 235 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 uc_338.31-201ENST00000615595 186 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AL122023.1-201ENST00000622847 530 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC114546.4-201ENST00000624413 369 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AP003175.1-201ENST00000641383 6658 ntBASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CCDC144BQ3MJ40 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 RNU6-252P-201ENST00000363232 107 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 RN7SKP269-201ENST00000365545 319 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 RNU6-354P-201ENST00000383862 107 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 RNU6-610P-201ENST00000384264 107 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC006065.1-201ENST00000422539 802 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 MTCO1P43-201ENST00000431831 488 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC006994.1-201ENST00000438212 839 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 PA2G4P6-201ENST00000438325 1197 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 GAPDHP33-201ENST00000443168 1013 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 POU5F1P5-201ENST00000445059 658 ntBASIC7.57□□□□□ -1.2
CCDC144BQ3MJ40 AC002075.1-201ENST00000457396 676 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms