Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 AC005034.3-201ENST00000604845 1747 ntBASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AC092725.2-201ENST00000567658 1389 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 RPS3AP2-201ENST00000407190 754 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 MIR1178-201ENST00000408396 91 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 RPS4XP5-201ENST00000419038 768 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 GAPDHP48-201ENST00000436626 961 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 RPSAP37-201ENST00000470913 821 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 ATP5LP3-201ENST00000514223 304 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 CYCSP22-201ENST00000517555 339 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 TMEM97P2-201ENST00000517841 403 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AC022404.1-201ENST00000555320 273 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AC091078.2-201ENST00000557145 559 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 GARSP1-201ENST00000570895 719 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AC023389.2-201ENST00000580031 955 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 NPM1P45-201ENST00000583151 559 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AC011497.2-201ENST00000600255 639 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AC027334.1-201ENST00000603257 310 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 PABPC1P8-201ENST00000452851 2086 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AL078595.2-201ENST00000605309 1780 ntBASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.95□□□□□ -1.3
SHROOM1Q2M3G4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AC016583.1-201ENST00000624221 2431 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AC016739.1-201ENST00000405359 345 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 OR2W4P-201ENST00000406496 926 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AL121776.1-201ENST00000429337 372 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 LYPLA1P1-201ENST00000434514 622 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 MRPS21P3-201ENST00000436696 262 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AC138866.2-201ENST00000508650 584 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AC074087.1-201ENST00000512059 724 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AC073581.1-201ENST00000519036 575 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AC007494.1-201ENST00000562293 760 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 AC067852.5-201ENST00000589299 310 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 MIR6826-201ENST00000617808 98 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 MIR6719-201ENST00000622428 87 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 MRE11P1-201ENST00000464884 2127 ntBASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM1Q2M3G4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SHROOM1Q2M3G4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms