Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
H3F3AP84243 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3AP84243 KIF4CP-201ENST00000422742 1279 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 MRPS21P2-201ENST00000424704 264 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 AC069154.1-201ENST00000432914 542 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 AL590399.4-201ENST00000436561 601 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 AMYP1-201ENST00000440059 1023 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 ATP5LP2-201ENST00000440646 311 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 RPS7P3-201ENST00000443360 580 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 BMS1P10-201ENST00000443754 1120 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 GEMIN2P1-201ENST00000454246 752 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.35□□□□□ -1.55
H3F3AP84243 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.35□□□□□ -1.55
H3F3AP84243 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.35□□□□□ -1.55
H3F3AP84243 RN7SKP70-201ENST00000516655 271 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.35□□□□□ -1.55
H3F3AP84243 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
H3F3AP84243 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.35□□□□□ -1.55
H3F3AP84243 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.35□□□□□ -1.55
H3F3AP84243 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.35□□□□□ -1.55
H3F3AP84243 AC007956.1-201ENST00000555623 542 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.35□□□□□ -1.55
H3F3AP84243 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.35□□□□□ -1.55
H3F3AP84243 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.35□□□□□ -1.55
H3F3AP84243 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.35□□□□□ -1.55
H3F3AP84243 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.35□□□□□ -1.55
H3F3AP84243 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.35□□□□□ -1.55
H3F3AP84243 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3AP84243 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.35□□□□□ -1.55
H3F3AP84243 AC108673.3-201ENST00000609183 335 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 AC096708.4-201ENST00000620563 552 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 AC024884.1-201ENST00000620583 399 ntBASIC5.35□□□□□ -1.55
H3F3AP84243 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3AP84243 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
H3F3AP84243 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3AP84243 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3AP84243 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3AP84243 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.34□□□□□ -1.55
H3F3AP84243 AC090220.1-201ENST00000593078 1699 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3AP84243 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
H3F3AP84243 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3AP84243 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3AP84243 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3AP84243 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3AP84243 IFIT1P1-201ENST00000400497 1449 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3AP84243 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
H3F3AP84243 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.34□□□□□ -1.55
H3F3AP84243 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3AP84243 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
H3F3AP84243 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
H3F3AP84243 RNA5SP211-201ENST00000365516 117 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 CXADRP1-201ENST00000398098 1095 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.34□□□□□ -1.55
H3F3AP84243 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.34□□□□□ -1.55
H3F3AP84243 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.34□□□□□ -1.55
H3F3AP84243 AC099677.3-201ENST00000427081 395 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.34□□□□□ -1.55
H3F3AP84243 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.34□□□□□ -1.55
H3F3AP84243 AL365220.1-201ENST00000432923 399 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 AL445928.1-201ENST00000435545 222 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 VN1R110P-201ENST00000438988 971 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 AL390879.1-201ENST00000439143 386 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 BX679664.2-201ENST00000439282 283 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.34□□□□□ -1.55
H3F3AP84243 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.34□□□□□ -1.55
H3F3AP84243 ACA64.4-201ENST00000459070 127 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 AC098847.1-201ENST00000473094 348 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 AP002884.1-201ENST00000479691 655 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.34□□□□□ -1.55
H3F3AP84243 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.34□□□□□ -1.55
H3F3AP84243 SCARNA18.1-201ENST00000516330 83 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 RNA5SP340-201ENST00000517132 107 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.34□□□□□ -1.55
H3F3AP84243 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.34□□□□□ -1.55
H3F3AP84243 AP003396.4-201ENST00000527574 265 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 BCAS2P1-201ENST00000528022 632 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 OR4A42P-201ENST00000531397 938 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.34□□□□□ -1.55
H3F3AP84243 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3AP84243 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.34□□□□□ -1.55
H3F3AP84243 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.34□□□□□ -1.55
H3F3AP84243 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.34□□□□□ -1.55
H3F3AP84243 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.34□□□□□ -1.55
H3F3AP84243 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.34□□□□□ -1.55
H3F3AP84243 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.34□□□□□ -1.55
H3F3AP84243 CXADRP3-202ENST00000617265 1100 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.34□□□□□ -1.55
H3F3AP84243 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.34□□□□□ -1.55
H3F3AP84243 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3AP84243 AC137056.2-201ENST00000624055 1958 ntBASIC5.34□□□□□ -1.55
H3F3AP84243 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
H3F3AP84243 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms