Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.91□□□□□ -1.46
RAE1P78406 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.91□□□□□ -1.46
RAE1P78406 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.91□□□□□ -1.46
RAE1P78406 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RAE1P78406 AC022106.1-201ENST00000612834 766 ntBASIC5.91□□□□□ -1.46
RAE1P78406 AC005899.6-201ENST00000620729 297 ntBASIC5.91□□□□□ -1.46
RAE1P78406 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.91□□□□□ -1.46
RAE1P78406 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.91□□□□□ -1.46
RAE1P78406 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RAE1P78406 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RAE1P78406 AC006600.2-201ENST00000624834 2506 ntBASIC5.91□□□□□ -1.46
RAE1P78406 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.91□□□□□ -1.46
RAE1P78406 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.91□□□□□ -1.46
RAE1P78406 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RAE1P78406 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAE1P78406 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAE1P78406 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAE1P78406 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.91□□□□□ -1.46
RAE1P78406 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RAE1P78406 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RAE1P78406 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RAE1P78406 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RAE1P78406 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RAE1P78406 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
RAE1P78406 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.9□□□□□ -1.46
RAE1P78406 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
RAE1P78406 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.9□□□□□ -1.46
RAE1P78406 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.9□□□□□ -1.46
RAE1P78406 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RAE1P78406 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RAE1P78406 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RAE1P78406 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RAE1P78406 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RAE1P78406 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RAE1P78406 AC092724.1-201ENST00000624623 3397 ntBASIC5.9□□□□□ -1.46
RAE1P78406 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RAE1P78406 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RAE1P78406 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RAE1P78406 ATP5F1P6-201ENST00000402768 767 ntBASIC5.9□□□□□ -1.46
RAE1P78406 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.9□□□□□ -1.46
RAE1P78406 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.9□□□□□ -1.46
RAE1P78406 GAPDHP19-201ENST00000431768 1005 ntBASIC5.9□□□□□ -1.46
RAE1P78406 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.9□□□□□ -1.46
RAE1P78406 PPIAP10-201ENST00000438675 458 ntBASIC5.9□□□□□ -1.46
RAE1P78406 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.9□□□□□ -1.46
RAE1P78406 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.9□□□□□ -1.46
RAE1P78406 RAB28P3-201ENST00000448325 597 ntBASIC5.9□□□□□ -1.46
RAE1P78406 RBMY2HP-201ENST00000457961 720 ntBASIC5.9□□□□□ -1.46
RAE1P78406 AC135999.1-201ENST00000478962 479 ntBASIC5.9□□□□□ -1.46
RAE1P78406 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.9□□□□□ -1.46
RAE1P78406 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.9□□□□□ -1.46
RAE1P78406 RNU6-334P-201ENST00000517072 102 ntBASIC5.9□□□□□ -1.46
RAE1P78406 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.9□□□□□ -1.46
RAE1P78406 CYCSP25-201ENST00000525280 316 ntBASIC5.9□□□□□ -1.46
RAE1P78406 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.9□□□□□ -1.46
RAE1P78406 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.9□□□□□ -1.46
RAE1P78406 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.9□□□□□ -1.46
RAE1P78406 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
RAE1P78406 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.9□□□□□ -1.46
RAE1P78406 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.9□□□□□ -1.46
RAE1P78406 CD24P2-201ENST00000565486 219 ntBASIC5.9□□□□□ -1.46
RAE1P78406 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.9□□□□□ -1.46
RAE1P78406 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.9□□□□□ -1.46
RAE1P78406 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
RAE1P78406 AC012368.3-201ENST00000604190 219 ntBASIC5.9□□□□□ -1.46
RAE1P78406 SNORA74.4-201ENST00000607595 199 ntBASIC5.9□□□□□ -1.46
RAE1P78406 MIR6774-201ENST00000614651 70 ntBASIC5.9□□□□□ -1.46
RAE1P78406 AC095038.2-201ENST00000621464 1070 ntBASIC5.9□□□□□ -1.46
RAE1P78406 AC068880.4-201ENST00000623082 495 ntBASIC5.9□□□□□ -1.46
RAE1P78406 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.9□□□□□ -1.46
RAE1P78406 AC008993.2-201ENST00000631744 806 ntBASIC5.9□□□□□ -1.46
RAE1P78406 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RAE1P78406 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RAE1P78406 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
RAE1P78406 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RAE1P78406 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RAE1P78406 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RAE1P78406 AC004014.2-201ENST00000623718 5122 ntBASIC5.9□□□□□ -1.47
RAE1P78406 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.9□□□□□ -1.47
RAE1P78406 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RAE1P78406 AC073342.2-201ENST00000595842 1800 ntBASIC5.9□□□□□ -1.47
RAE1P78406 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
RAE1P78406 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RAE1P78406 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RAE1P78406 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.89□□□□□ -1.47
RAE1P78406 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
RAE1P78406 AL359091.1-201ENST00000449048 1734 ntBASIC5.89□□□□□ -1.47
RAE1P78406 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RAE1P78406 RNU6-1257P-201ENST00000384625 110 ntBASIC5.89□□□□□ -1.47
RAE1P78406 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RAE1P78406 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RAE1P78406 YWHAZP4-201ENST00000392459 708 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms