Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.21□□□□□ -1.58
HIST1H3AP68431 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HIST1H3AP68431 AC012254.3-201ENST00000591183 2117 ntBASIC5.21□□□□□ -1.58
HIST1H3AP68431 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HIST1H3AP68431 AC025470.1-201ENST00000510053 2032 ntBASIC5.21□□□□□ -1.58
HIST1H3AP68431 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HIST1H3AP68431 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HIST1H3AP68431 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HIST1H3AP68431 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 RNA5SP279-201ENST00000365513 117 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 SNORA51.9-201ENST00000384295 124 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 GCNT1P4-201ENST00000404096 329 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AL445928.1-201ENST00000435545 222 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 PNKDP1-201ENST00000435914 430 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 TIMM8BP2-201ENST00000445940 251 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 RN7SL269P-201ENST00000467795 305 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 PFN1P6-201ENST00000476786 399 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 RPL38P3-201ENST00000484463 213 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 PRMT5P1-201ENST00000514351 598 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 AC009879.1-201ENST00000520029 839 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AL121594.2-201ENST00000541658 472 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AL163952.1-202ENST00000569625 600 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AC125494.2-201ENST00000602431 657 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 AC005828.7-201ENST00000607331 556 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AL445670.1-201ENST00000618889 801 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 AL353684.1-201ENST00000622677 1120 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AP000550.3-201ENST00000637734 379 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 AC008627.1-201ENST00000517511 1704 ntBASIC5.2□□□□□ -1.58
HIST1H3AP68431 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
HIST1H3AP68431 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 AL354854.1-201ENST00000455940 1363 ntBASIC5.19□□□□□ -1.58
HIST1H3AP68431 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 RN7SKP77-201ENST00000363261 353 ntBASIC5.19□□□□□ -1.58
HIST1H3AP68431 RN7SKP171-201ENST00000364417 303 ntBASIC5.19□□□□□ -1.58
HIST1H3AP68431 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 GAPDHP75-201ENST00000433910 943 ntBASIC5.19□□□□□ -1.58
HIST1H3AP68431 AL663074.2-201ENST00000440621 479 ntBASIC5.19□□□□□ -1.58
HIST1H3AP68431 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HIST1H3AP68431 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 AC008629.2-201ENST00000503783 483 ntBASIC5.19□□□□□ -1.58
HIST1H3AP68431 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 HSD3BP3-201ENST00000514706 994 ntBASIC5.19□□□□□ -1.58
HIST1H3AP68431 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.19□□□□□ -1.58
HIST1H3AP68431 AC078899.1-201ENST00000521432 1185 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 257.4 ms