Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL391987.1-201ENST00000441025 200 ntBASIC7.3□□□□□ -1.24
RHBDL3P58872 AL606490.8-201ENST00000441624 319 ntBASIC7.3□□□□□ -1.24
RHBDL3P58872 AL512605.1-202ENST00000441919 381 ntBASIC7.3□□□□□ -1.24
RHBDL3P58872 AL359955.2-201ENST00000445380 353 ntBASIC7.3□□□□□ -1.24
RHBDL3P58872 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC7.3□□□□□ -1.24
RHBDL3P58872 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.3□□□□□ -1.24
RHBDL3P58872 AC007688.1-201ENST00000475592 759 ntBASIC7.3□□□□□ -1.24
RHBDL3P58872 AC012123.2-201ENST00000485809 248 ntBASIC7.3□□□□□ -1.24
RHBDL3P58872 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RHBDL3P58872 MTATP6P1-201ENST00000514057 681 ntBASIC7.3□□□□□ -1.24
RHBDL3P58872 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.3□□□□□ -1.24
RHBDL3P58872 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.3□□□□□ -1.24
RHBDL3P58872 SNRPGP1-201ENST00000553864 222 ntBASIC7.3□□□□□ -1.24
RHBDL3P58872 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.3□□□□□ -1.24
RHBDL3P58872 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.3□□□□□ -1.24
RHBDL3P58872 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.3□□□□□ -1.24
RHBDL3P58872 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RHBDL3P58872 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RHBDL3P58872 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.3□□□□□ -1.24
RHBDL3P58872 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.3□□□□□ -1.24
RHBDL3P58872 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.3□□□□□ -1.24
RHBDL3P58872 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.3□□□□□ -1.24
RHBDL3P58872 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.3□□□□□ -1.24
RHBDL3P58872 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.3□□□□□ -1.24
RHBDL3P58872 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
RHBDL3P58872 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.3□□□□□ -1.24
RHBDL3P58872 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.29□□□□□ -1.24
RHBDL3P58872 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RHBDL3P58872 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.29□□□□□ -1.24
RHBDL3P58872 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
RHBDL3P58872 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.29□□□□□ -1.24
RHBDL3P58872 AC011815.2-201ENST00000618230 2021 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RHBDL3P58872 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RHBDL3P58872 RN7SKP69-201ENST00000365390 305 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 RN7SKP292-201ENST00000365522 317 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
RHBDL3P58872 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.29□□□□□ -1.24
RHBDL3P58872 RPS15AP30-201ENST00000420976 390 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.29□□□□□ -1.24
RHBDL3P58872 DSTNP5-201ENST00000427921 523 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 BX323845.3-201ENST00000428215 527 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 PCBP2P1-201ENST00000437262 977 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.29□□□□□ -1.24
RHBDL3P58872 AL445466.1-201ENST00000448432 357 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 GEMIN2P1-201ENST00000454246 752 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.29□□□□□ -1.24
RHBDL3P58872 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.29□□□□□ -1.24
RHBDL3P58872 PPP1R11P1-201ENST00000486095 376 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 AC104109.1-201ENST00000498563 436 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.29□□□□□ -1.24
RHBDL3P58872 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC7.29□□□□□ -1.24
RHBDL3P58872 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 AC008147.3-201ENST00000548666 354 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 AC074029.2-201ENST00000551045 634 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.29□□□□□ -1.24
RHBDL3P58872 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC7.29□□□□□ -1.24
RHBDL3P58872 HMGB1P51-201ENST00000605166 638 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.29□□□□□ -1.24
RHBDL3P58872 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
RHBDL3P58872 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 AC005618.1-201ENST00000606901 3148 ntBASIC7.29□□□□□ -1.24
RHBDL3P58872 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.29□□□□□ -1.24
RHBDL3P58872 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
RHBDL3P58872 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RHBDL3P58872 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RHBDL3P58872 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.28□□□□□ -1.24
RHBDL3P58872 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.28□□□□□ -1.24
RHBDL3P58872 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RHBDL3P58872 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 CASC19-243ENST00000641588 1546 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
RHBDL3P58872 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 AC010132.2-201ENST00000295493 1043 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 OR52B3P-201ENST00000314715 928 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.28□□□□□ -1.24
RHBDL3P58872 AL672167.2-201ENST00000377164 879 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 RNA5SP284-201ENST00000384547 118 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 SNORD65-201ENST00000391079 73 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 CHEK2P5-201ENST00000423877 246 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC7.28□□□□□ -1.24
RHBDL3P58872 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.28□□□□□ -1.24
RHBDL3P58872 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms