Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.61□□□□□ -1.51
LIM2P55344 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LIM2P55344 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.6□□□□□ -1.51
LIM2P55344 RNA5SP273-201ENST00000362484 113 ntBASIC5.6□□□□□ -1.51
LIM2P55344 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.6□□□□□ -1.51
LIM2P55344 RPS4XP5-201ENST00000419038 768 ntBASIC5.6□□□□□ -1.51
LIM2P55344 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.6□□□□□ -1.51
LIM2P55344 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.6□□□□□ -1.51
LIM2P55344 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.6□□□□□ -1.51
LIM2P55344 AC115283.1-201ENST00000427353 400 ntBASIC5.6□□□□□ -1.51
LIM2P55344 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.6□□□□□ -1.51
LIM2P55344 AC073410.1-201ENST00000435125 589 ntBASIC5.6□□□□□ -1.51
LIM2P55344 VN1R110P-201ENST00000438988 971 ntBASIC5.6□□□□□ -1.51
LIM2P55344 AL663074.2-201ENST00000440621 479 ntBASIC5.6□□□□□ -1.51
LIM2P55344 AL603882.1-201ENST00000463059 681 ntBASIC5.6□□□□□ -1.51
LIM2P55344 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.6□□□□□ -1.51
LIM2P55344 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
LIM2P55344 TRBV5-2-201ENST00000489095 273 ntBASIC5.6□□□□□ -1.51
LIM2P55344 RN7SL193P-201ENST00000491708 276 ntBASIC5.6□□□□□ -1.51
LIM2P55344 USP9YP2-201ENST00000504503 1000 ntBASIC5.6□□□□□ -1.51
LIM2P55344 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.6□□□□□ -1.51
LIM2P55344 USP9YP1-201ENST00000513521 1002 ntBASIC5.6□□□□□ -1.51
LIM2P55344 SETP21-201ENST00000514799 892 ntBASIC5.6□□□□□ -1.51
LIM2P55344 WBP1LP3-201ENST00000523033 208 ntBASIC5.6□□□□□ -1.51
LIM2P55344 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.6□□□□□ -1.51
LIM2P55344 AC005363.1-201ENST00000530779 351 ntBASIC5.6□□□□□ -1.51
LIM2P55344 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.6□□□□□ -1.51
LIM2P55344 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.6□□□□□ -1.51
LIM2P55344 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.6□□□□□ -1.51
LIM2P55344 MIR4776-2-201ENST00000580204 80 ntBASIC5.6□□□□□ -1.51
LIM2P55344 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.6□□□□□ -1.51
LIM2P55344 MIR4420-201ENST00000583944 77 ntBASIC5.6□□□□□ -1.51
LIM2P55344 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.6□□□□□ -1.51
LIM2P55344 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.6□□□□□ -1.51
LIM2P55344 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.6□□□□□ -1.51
LIM2P55344 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.6□□□□□ -1.51
LIM2P55344 SNX18P12-201ENST00000624821 759 ntBASIC5.6□□□□□ -1.51
LIM2P55344 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.6□□□□□ -1.51
LIM2P55344 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.6□□□□□ -1.51
LIM2P55344 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
LIM2P55344 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LIM2P55344 AC005224.3-201ENST00000584683 2140 ntBASIC5.6□□□□□ -1.51
LIM2P55344 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.6□□□□□ -1.51
LIM2P55344 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.6□□□□□ -1.51
LIM2P55344 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIM2P55344 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.59□□□□□ -1.51
LIM2P55344 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LIM2P55344 AL591135.1-201ENST00000401578 5914 ntBASIC5.59□□□□□ -1.51
LIM2P55344 MTCO1P46-201ENST00000451639 1491 ntBASIC5.59□□□□□ -1.51
LIM2P55344 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.59□□□□□ -1.51
LIM2P55344 OR52B5P-204ENST00000641744 3467 ntBASIC5.59□□□□□ -1.51
LIM2P55344 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
LIM2P55344 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LIM2P55344 RNA5SP477-201ENST00000362639 119 ntBASIC5.59□□□□□ -1.51
LIM2P55344 RN7SKP128-201ENST00000364270 303 ntBASIC5.59□□□□□ -1.51
LIM2P55344 AC016739.1-201ENST00000405359 345 ntBASIC5.59□□□□□ -1.51
LIM2P55344 RN7SKP240-201ENST00000410583 375 ntBASIC5.59□□□□□ -1.51
LIM2P55344 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LIM2P55344 BX284632.2-201ENST00000421091 399 ntBASIC5.59□□□□□ -1.51
LIM2P55344 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.59□□□□□ -1.51
LIM2P55344 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LIM2P55344 AK3P5-201ENST00000432033 519 ntBASIC5.59□□□□□ -1.51
LIM2P55344 RPS12P17-201ENST00000438591 377 ntBASIC5.59□□□□□ -1.51
LIM2P55344 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.59□□□□□ -1.51
LIM2P55344 AL512605.1-202ENST00000441919 381 ntBASIC5.59□□□□□ -1.51
LIM2P55344 AL359955.2-201ENST00000445380 353 ntBASIC5.59□□□□□ -1.51
LIM2P55344 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.59□□□□□ -1.51
LIM2P55344 OR52E7P-201ENST00000452394 933 ntBASIC5.59□□□□□ -1.51
LIM2P55344 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.59□□□□□ -1.51
LIM2P55344 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.59□□□□□ -1.51
LIM2P55344 OR5H7P-201ENST00000514084 930 ntBASIC5.59□□□□□ -1.51
LIM2P55344 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.59□□□□□ -1.51
LIM2P55344 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.59□□□□□ -1.51
LIM2P55344 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.59□□□□□ -1.51
LIM2P55344 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.59□□□□□ -1.51
LIM2P55344 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.59□□□□□ -1.51
LIM2P55344 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.59□□□□□ -1.51
LIM2P55344 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.59□□□□□ -1.51
LIM2P55344 AC079315.1-201ENST00000602952 623 ntBASIC5.59□□□□□ -1.51
LIM2P55344 AC145423.1-201ENST00000605712 336 ntBASIC5.59□□□□□ -1.51
LIM2P55344 AC093388.1-201ENST00000609166 430 ntBASIC5.59□□□□□ -1.51
LIM2P55344 AL445670.1-201ENST00000618889 801 ntBASIC5.59□□□□□ -1.51
LIM2P55344 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms