Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH11P55287 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH11P55287 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH11P55287 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH11P55287 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 OR4G1P-202ENST00000641173 1788 ntBASIC5.6□□□□□ -1.51
CDH11P55287 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH11P55287 AC015799.1-201ENST00000622996 3122 ntBASIC5.59□□□□□ -1.51
CDH11P55287 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
CDH11P55287 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
CDH11P55287 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH11P55287 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH11P55287 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH11P55287 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH11P55287 OR5T3-201ENST00000303059 1023 ntBASIC5.59□□□□□ -1.51
CDH11P55287 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDH11P55287 OR7E25P-201ENST00000344844 931 ntBASIC5.59□□□□□ -1.51
CDH11P55287 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.59□□□□□ -1.51
CDH11P55287 YWHAZP6-201ENST00000399764 738 ntBASIC5.59□□□□□ -1.51
CDH11P55287 AL121977.1-201ENST00000401636 979 ntBASIC5.59□□□□□ -1.51
CDH11P55287 SNORA11.3-201ENST00000408471 128 ntBASIC5.59□□□□□ -1.51
CDH11P55287 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH11P55287 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH11P55287 RPL7AP14-201ENST00000424041 802 ntBASIC5.59□□□□□ -1.51
CDH11P55287 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH11P55287 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH11P55287 AL354707.3-201ENST00000427308 331 ntBASIC5.59□□□□□ -1.51
CDH11P55287 EMC3-AS1-205ENST00000438698 534 ntBASIC5.59□□□□□ -1.51
CDH11P55287 XKRYP6-201ENST00000440468 1116 ntBASIC5.59□□□□□ -1.51
CDH11P55287 XKRYP3-201ENST00000442113 1116 ntBASIC5.59□□□□□ -1.51
CDH11P55287 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH11P55287 RAB28P2-201ENST00000454299 641 ntBASIC5.59□□□□□ -1.51
CDH11P55287 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH11P55287 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH11P55287 PFN1P8-201ENST00000497012 543 ntBASIC5.59□□□□□ -1.51
CDH11P55287 AC090058.1-201ENST00000498788 435 ntBASIC5.59□□□□□ -1.51
CDH11P55287 AC018797.1-201ENST00000510791 255 ntBASIC5.59□□□□□ -1.51
CDH11P55287 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH11P55287 OR6M2P-201ENST00000529831 871 ntBASIC5.59□□□□□ -1.51
CDH11P55287 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH11P55287 AC084121.1-201ENST00000533882 835 ntBASIC5.59□□□□□ -1.51
CDH11P55287 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH11P55287 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.59□□□□□ -1.51
CDH11P55287 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH11P55287 SNRPGP1-201ENST00000553864 222 ntBASIC5.59□□□□□ -1.51
CDH11P55287 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH11P55287 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH11P55287 AC002310.3-201ENST00000569728 723 ntBASIC5.59□□□□□ -1.51
CDH11P55287 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH11P55287 MIR4502-201ENST00000580432 81 ntBASIC5.59□□□□□ -1.51
CDH11P55287 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH11P55287 SMIM12P1-201ENST00000603004 274 ntBASIC5.59□□□□□ -1.51
CDH11P55287 SNORA11.6-201ENST00000619030 128 ntBASIC5.59□□□□□ -1.51
CDH11P55287 AL118508.4-201ENST00000624142 1176 ntBASIC5.59□□□□□ -1.51
CDH11P55287 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.59□□□□□ -1.51
CDH11P55287 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.59□□□□□ -1.51
CDH11P55287 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.59□□□□□ -1.51
CDH11P55287 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDH11P55287 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDH11P55287 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDH11P55287 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDH11P55287 AL359091.1-201ENST00000449048 1734 ntBASIC5.59□□□□□ -1.51
CDH11P55287 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CDH11P55287 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CDH11P55287 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.59□□□□□ -1.52
CDH11P55287 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
CDH11P55287 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH11P55287 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH11P55287 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH11P55287 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDH11P55287 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 AL589826.1-201ENST00000340697 249 ntBASIC5.58□□□□□ -1.52
CDH11P55287 DHFRP5-201ENST00000406944 564 ntBASIC5.58□□□□□ -1.52
CDH11P55287 RPL21P50-201ENST00000417698 477 ntBASIC5.58□□□□□ -1.52
CDH11P55287 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDH11P55287 SETP9-201ENST00000423837 832 ntBASIC5.58□□□□□ -1.52
CDH11P55287 AL590399.2-201ENST00000427536 309 ntBASIC5.58□□□□□ -1.52
CDH11P55287 AC013410.1-201ENST00000436223 1232 ntBASIC5.58□□□□□ -1.52
CDH11P55287 OR2L9P-201ENST00000444456 913 ntBASIC5.58□□□□□ -1.52
CDH11P55287 AC017099.1-201ENST00000448261 1028 ntBASIC5.58□□□□□ -1.52
CDH11P55287 TAAR4P-201ENST00000454843 1039 ntBASIC5.58□□□□□ -1.52
CDH11P55287 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH11P55287 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH11P55287 SEPT7P6-201ENST00000469999 1143 ntBASIC5.58□□□□□ -1.52
CDH11P55287 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.58□□□□□ -1.52
CDH11P55287 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.58□□□□□ -1.52
CDH11P55287 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.58□□□□□ -1.52
CDH11P55287 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms