Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC084851.2-201ENST00000530377 364 ntBASIC6.04□□□□□ -1.44
NR1H2P55055 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.04□□□□□ -1.44
NR1H2P55055 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.04□□□□□ -1.44
NR1H2P55055 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.04□□□□□ -1.44
NR1H2P55055 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.04□□□□□ -1.44
NR1H2P55055 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.04□□□□□ -1.44
NR1H2P55055 CTSLP2-201ENST00000580501 394 ntBASIC6.04□□□□□ -1.44
NR1H2P55055 AP001357.1-201ENST00000586304 1053 ntBASIC6.04□□□□□ -1.44
NR1H2P55055 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.04□□□□□ -1.44
NR1H2P55055 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.04□□□□□ -1.44
NR1H2P55055 AL096803.3-201ENST00000609032 532 ntBASIC6.04□□□□□ -1.44
NR1H2P55055 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.04□□□□□ -1.44
NR1H2P55055 RNU6-368P-201ENST00000620928 107 ntBASIC6.04□□□□□ -1.44
NR1H2P55055 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NR1H2P55055 RNU6-538P-201ENST00000622329 107 ntBASIC6.04□□□□□ -1.44
NR1H2P55055 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.04□□□□□ -1.44
NR1H2P55055 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
NR1H2P55055 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.04□□□□□ -1.44
NR1H2P55055 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NR1H2P55055 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.04□□□□□ -1.44
NR1H2P55055 AL161912.4-201ENST00000623889 2468 ntBASIC6.04□□□□□ -1.44
NR1H2P55055 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NR1H2P55055 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NR1H2P55055 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 KARSP1-201ENST00000451871 1752 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NR1H2P55055 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.03□□□□□ -1.44
NR1H2P55055 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.03□□□□□ -1.44
NR1H2P55055 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NR1H2P55055 RNU4-7P-201ENST00000364758 141 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 SNORD51.1-201ENST00000365405 77 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NR1H2P55055 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
NR1H2P55055 GAPDHP15-201ENST00000398586 975 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
NR1H2P55055 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.03□□□□□ -1.44
NR1H2P55055 AL663061.1-201ENST00000416625 580 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.03□□□□□ -1.44
NR1H2P55055 RPS26P13-201ENST00000419030 330 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.03□□□□□ -1.44
NR1H2P55055 CYCSP52-201ENST00000422857 310 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 AC000089.1-201ENST00000424559 801 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 AC239367.3-201ENST00000428996 814 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 Z68868.1-201ENST00000429048 544 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 RPS26P4-201ENST00000431743 355 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.03□□□□□ -1.44
NR1H2P55055 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.03□□□□□ -1.44
NR1H2P55055 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.03□□□□□ -1.44
NR1H2P55055 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.03□□□□□ -1.44
NR1H2P55055 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.03□□□□□ -1.44
NR1H2P55055 AL022319.1-201ENST00000458183 1167 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.03□□□□□ -1.44
NR1H2P55055 AC090602.1-201ENST00000469695 252 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 RPL29P23-201ENST00000486188 442 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 RN7SL284P-201ENST00000498823 275 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 HAUS1P1-201ENST00000505275 832 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.03□□□□□ -1.44
NR1H2P55055 AC007537.1-201ENST00000539347 327 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.03□□□□□ -1.44
NR1H2P55055 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.03□□□□□ -1.44
NR1H2P55055 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.03□□□□□ -1.44
NR1H2P55055 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.03□□□□□ -1.44
NR1H2P55055 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.03□□□□□ -1.44
NR1H2P55055 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.03□□□□□ -1.44
NR1H2P55055 AL157899.1-201ENST00000604110 936 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 AC005014.3-201ENST00000605985 190 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.03□□□□□ -1.44
NR1H2P55055 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
NR1H2P55055 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 MIR6823-201ENST00000622118 61 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.03□□□□□ -1.44
NR1H2P55055 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
NR1H2P55055 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
NR1H2P55055 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 AC090181.3-201ENST00000624777 1514 ntBASIC6.03□□□□□ -1.44
NR1H2P55055 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
NR1H2P55055 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NR1H2P55055 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.03□□□□□ -1.44
NR1H2P55055 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.03□□□□□ -1.44
NR1H2P55055 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
NR1H2P55055 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.02□□□□□ -1.44
NR1H2P55055 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
NR1H2P55055 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NR1H2P55055 AC092701.1-201ENST00000623627 1551 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms