Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AL139158.1-201ENST00000424719 340 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 AC130360.1-201ENST00000425489 1117 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 AL390879.2-203ENST00000426943 1121 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 AC108479.1-201ENST00000431142 427 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 AC010240.2-201ENST00000445363 1205 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.56□□□□□ -1.52
APOBEC1P41238 HMGB1P7-201ENST00000450921 612 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.56□□□□□ -1.52
APOBEC1P41238 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
APOBEC1P41238 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.56□□□□□ -1.52
APOBEC1P41238 RNA5SP434-201ENST00000516647 121 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 RNA5SP441-201ENST00000516809 88 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.56□□□□□ -1.52
APOBEC1P41238 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.56□□□□□ -1.52
APOBEC1P41238 MTND1P36-201ENST00000522384 936 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AC130365.2-201ENST00000525882 1201 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 OR10D4P-201ENST00000525892 951 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 AC021269.1-201ENST00000526860 705 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AC002519.2-203ENST00000567043 837 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AL080312.2-201ENST00000613001 630 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOBEC1P41238 AC048341.3-201ENST00000619323 491 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 AL162377.2-201ENST00000624532 337 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.56□□□□□ -1.52
APOBEC1P41238 TTC41P-205ENST00000551270 3963 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 IMMTP1-201ENST00000435590 2219 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 ZNF101P1-201ENST00000435701 1720 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.56□□□□□ -1.52
APOBEC1P41238 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOBEC1P41238 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
APOBEC1P41238 AC068769.1-201ENST00000474767 2426 ntBASIC5.56□□□□□ -1.52
APOBEC1P41238 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.56□□□□□ -1.52
APOBEC1P41238 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
APOBEC1P41238 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOBEC1P41238 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.56□□□□□ -1.52
APOBEC1P41238 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOBEC1P41238 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
APOBEC1P41238 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOBEC1P41238 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.55□□□□□ -1.52
APOBEC1P41238 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.55□□□□□ -1.52
APOBEC1P41238 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
APOBEC1P41238 EIF3EP1-201ENST00000433978 1316 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOBEC1P41238 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.55□□□□□ -1.52
APOBEC1P41238 RBBP4P5-201ENST00000398583 1266 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOBEC1P41238 YWHAZP6-201ENST00000399764 738 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.55□□□□□ -1.52
APOBEC1P41238 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOBEC1P41238 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.55□□□□□ -1.52
APOBEC1P41238 VN1R31P-201ENST00000417498 730 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.55□□□□□ -1.52
APOBEC1P41238 MRPS33P4-201ENST00000434892 317 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.55□□□□□ -1.52
APOBEC1P41238 CLNS1AP1-201ENST00000435954 682 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.55□□□□□ -1.52
APOBEC1P41238 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.55□□□□□ -1.52
APOBEC1P41238 TIMM8BP2-201ENST00000445940 251 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.55□□□□□ -1.52
APOBEC1P41238 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.55□□□□□ -1.52
APOBEC1P41238 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.55□□□□□ -1.52
APOBEC1P41238 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.55□□□□□ -1.52
APOBEC1P41238 AC112484.3-201ENST00000505910 329 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.55□□□□□ -1.52
APOBEC1P41238 SETP12-201ENST00000514068 805 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 MAST4-IT1-201ENST00000514241 658 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 RN7SKP248-201ENST00000516278 305 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 SEC11B-201ENST00000518383 499 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 AC006518.1-201ENST00000541449 943 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.55□□□□□ -1.52
APOBEC1P41238 AC007494.1-201ENST00000562293 760 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 AC093524.1-201ENST00000564266 1094 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 MTND4LP25-201ENST00000570218 163 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 MTND2P13-201ENST00000577438 1039 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.55□□□□□ -1.52
APOBEC1P41238 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOBEC1P41238 RN7SL261P-201ENST00000613441 282 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 uc_338.31-201ENST00000615595 186 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 AC021422.1-201ENST00000621212 473 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.55□□□□□ -1.52
APOBEC1P41238 AL357140.4-201ENST00000636827 412 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 CASC19-274ENST00000642018 970 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOBEC1P41238 CR382285.2-201ENST00000624662 1495 ntBASIC5.55□□□□□ -1.52
APOBEC1P41238 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOBEC1P41238 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.55□□□□□ -1.52
APOBEC1P41238 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOBEC1P41238 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOBEC1P41238 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOBEC1P41238 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms