Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
HNF4AP41235 AL133243.2-201ENST00000610331 1621 ntBASIC5.99□□□□□ -1.45
HNF4AP41235 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.99□□□□□ -1.45
HNF4AP41235 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HNF4AP41235 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HNF4AP41235 AC024651.2-201ENST00000562480 2098 ntBASIC5.98□□□□□ -1.45
HNF4AP41235 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.98□□□□□ -1.45
HNF4AP41235 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HNF4AP41235 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
HNF4AP41235 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.98□□□□□ -1.45
HNF4AP41235 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.98□□□□□ -1.45
HNF4AP41235 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.98□□□□□ -1.45
HNF4AP41235 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.98□□□□□ -1.45
HNF4AP41235 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
HNF4AP41235 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.98□□□□□ -1.45
HNF4AP41235 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.98□□□□□ -1.45
HNF4AP41235 THEM7P-201ENST00000419556 672 ntBASIC5.98□□□□□ -1.45
HNF4AP41235 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 BX679664.2-201ENST00000439282 283 ntBASIC5.98□□□□□ -1.45
HNF4AP41235 AL645936.1-201ENST00000441979 518 ntBASIC5.98□□□□□ -1.45
HNF4AP41235 GAPDHP23-201ENST00000444823 993 ntBASIC5.98□□□□□ -1.45
HNF4AP41235 MTND4LP12-201ENST00000448237 295 ntBASIC5.98□□□□□ -1.45
HNF4AP41235 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.98□□□□□ -1.45
HNF4AP41235 RN7SL836P-201ENST00000476140 296 ntBASIC5.98□□□□□ -1.45
HNF4AP41235 AC106822.1-201ENST00000502647 526 ntBASIC5.98□□□□□ -1.45
HNF4AP41235 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.98□□□□□ -1.45
HNF4AP41235 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.98□□□□□ -1.45
HNF4AP41235 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.98□□□□□ -1.45
HNF4AP41235 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.98□□□□□ -1.45
HNF4AP41235 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 AC027334.1-201ENST00000603257 310 ntBASIC5.98□□□□□ -1.45
HNF4AP41235 MIR6889-201ENST00000613185 59 ntBASIC5.98□□□□□ -1.45
HNF4AP41235 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.98□□□□□ -1.45
HNF4AP41235 AC099654.6-201ENST00000636487 512 ntBASIC5.98□□□□□ -1.45
HNF4AP41235 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.98□□□□□ -1.45
HNF4AP41235 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HNF4AP41235 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.98□□□□□ -1.45
HNF4AP41235 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HNF4AP41235 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HNF4AP41235 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.98□□□□□ -1.45
HNF4AP41235 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.98□□□□□ -1.45
HNF4AP41235 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.98□□□□□ -1.45
HNF4AP41235 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HNF4AP41235 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.98□□□□□ -1.45
HNF4AP41235 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HNF4AP41235 AC003985.2-201ENST00000562268 1669 ntBASIC5.98□□□□□ -1.45
HNF4AP41235 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HNF4AP41235 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HNF4AP41235 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.97□□□□□ -1.45
HNF4AP41235 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HNF4AP41235 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
HNF4AP41235 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HNF4AP41235 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HNF4AP41235 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HNF4AP41235 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HNF4AP41235 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.97□□□□□ -1.45
HNF4AP41235 AC027575.3-201ENST00000583058 2747 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HNF4AP41235 RNA5SP346-201ENST00000363541 121 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 RNU1-59P-201ENST00000364829 162 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 RNA5SP279-201ENST00000365513 117 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 RNU6-729P-201ENST00000384399 107 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.97□□□□□ -1.45
HNF4AP41235 MGAT2P2-201ENST00000427194 797 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 AC094019.1-201ENST00000434678 472 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HNF4AP41235 RAB28P2-201ENST00000454299 641 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 AC112187.1-201ENST00000455837 479 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 AC073594.1-201ENST00000462065 364 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HNF4AP41235 AC113367.2-201ENST00000505749 160 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.97□□□□□ -1.45
HNF4AP41235 Y_RNA.710-201ENST00000516975 110 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 AC008429.4-201ENST00000521201 182 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 OR4A42P-201ENST00000531397 938 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 OR4A41P-201ENST00000533053 928 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HNF4AP41235 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HNF4AP41235 AC121758.1-202ENST00000556917 658 ntBASIC5.97□□□□□ -1.45
HNF4AP41235 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.97□□□□□ -1.45
HNF4AP41235 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.97□□□□□ -1.45
HNF4AP41235 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms