Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.04□□□□□ -1.44
FDFT1P37268 AL445928.1-201ENST00000435545 222 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 AC023141.3-201ENST00000436698 278 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 RPS7P3-201ENST00000443360 580 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 AL445466.1-201ENST00000448432 357 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 AC108751.3-201ENST00000461814 1020 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 RPL38P3-201ENST00000484463 213 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 RN7SL284P-201ENST00000498823 275 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 OR7E99P-201ENST00000505750 922 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.04□□□□□ -1.44
FDFT1P37268 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FDFT1P37268 AC136777.2-201ENST00000522979 358 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
FDFT1P37268 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.04□□□□□ -1.44
FDFT1P37268 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.04□□□□□ -1.44
FDFT1P37268 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.04□□□□□ -1.44
FDFT1P37268 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.04□□□□□ -1.44
FDFT1P37268 AC090826.1-203ENST00000569235 490 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.04□□□□□ -1.44
FDFT1P37268 AC060780.2-201ENST00000589047 198 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 AC005479.3-201ENST00000602790 431 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 AC073333.2-201ENST00000603589 769 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.04□□□□□ -1.44
FDFT1P37268 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
FDFT1P37268 AC009120.7-201ENST00000623452 780 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.04□□□□□ -1.44
FDFT1P37268 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.04□□□□□ -1.44
FDFT1P37268 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
FDFT1P37268 AL132656.3-201ENST00000606384 1595 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FDFT1P37268 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
FDFT1P37268 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FDFT1P37268 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
FDFT1P37268 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.04□□□□□ -1.44
FDFT1P37268 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
FDFT1P37268 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 OR4G1P-202ENST00000641173 1788 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 AC093671.1-201ENST00000624981 2929 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.03□□□□□ -1.44
FDFT1P37268 AC004656.1-201ENST00000568479 4951 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
FDFT1P37268 RPL11P3-201ENST00000395256 523 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
FDFT1P37268 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.03□□□□□ -1.44
FDFT1P37268 THEM7P-201ENST00000419556 672 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 CRIP1P1-201ENST00000427567 185 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 HMGB1P7-201ENST00000450921 612 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 FRG2FP-204ENST00000453982 852 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 PDCL3P4-201ENST00000489621 720 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 AC008629.2-201ENST00000503783 483 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 AC097486.1-201ENST00000515331 210 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 MIR2117-201ENST00000516780 80 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 AC116917.1-201ENST00000520558 305 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.03□□□□□ -1.44
FDFT1P37268 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.03□□□□□ -1.44
FDFT1P37268 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.03□□□□□ -1.44
FDFT1P37268 AC011500.1-201ENST00000601963 469 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.03□□□□□ -1.44
FDFT1P37268 AL133481.2-203ENST00000607558 139 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 uc_338.31-201ENST00000615595 186 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 RNA5SP439-201ENST00000617595 124 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 AC018628.1-201ENST00000624147 3819 ntBASIC6.03□□□□□ -1.44
FDFT1P37268 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.03□□□□□ -1.44
FDFT1P37268 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.03□□□□□ -1.44
FDFT1P37268 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.03□□□□□ -1.44
FDFT1P37268 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
FDFT1P37268 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.03□□□□□ -1.44
FDFT1P37268 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FDFT1P37268 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.02□□□□□ -1.45
FDFT1P37268 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.02□□□□□ -1.45
FDFT1P37268 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FDFT1P37268 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
FDFT1P37268 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
FDFT1P37268 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
FDFT1P37268 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
FDFT1P37268 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
FDFT1P37268 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.02□□□□□ -1.45
FDFT1P37268 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FDFT1P37268 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FDFT1P37268 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
FDFT1P37268 RPS4XP5-201ENST00000419038 768 ntBASIC6.02□□□□□ -1.45
FDFT1P37268 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.02□□□□□ -1.45
FDFT1P37268 RPSAP65-201ENST00000429660 595 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms