Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC009283.1-201ENST00000615852 645 ntBASIC4.24□□□□□ -1.73
CKS2P33552 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.24□□□□□ -1.73
CKS2P33552 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CKS2P33552 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.24□□□□□ -1.73
CKS2P33552 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.24□□□□□ -1.73
CKS2P33552 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.24□□□□□ -1.73
CKS2P33552 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CKS2P33552 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.24□□□□□ -1.73
CKS2P33552 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.24□□□□□ -1.73
CKS2P33552 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CKS2P33552 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.24□□□□□ -1.73
CKS2P33552 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CKS2P33552 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CKS2P33552 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 FBXL21-201ENST00000297158 1305 ntBASIC4.23□□□□□ -1.73
CKS2P33552 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS2P33552 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC4.23□□□□□ -1.73
CKS2P33552 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS2P33552 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.23□□□□□ -1.73
CKS2P33552 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.23□□□□□ -1.73
CKS2P33552 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CKS2P33552 U3.7-201ENST00000363668 216 ntBASIC4.23□□□□□ -1.73
CKS2P33552 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.23□□□□□ -1.73
CKS2P33552 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 AL139100.1-201ENST00000408001 498 ntBASIC4.23□□□□□ -1.73
CKS2P33552 RNA5SP431-201ENST00000410312 120 ntBASIC4.23□□□□□ -1.73
CKS2P33552 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.23□□□□□ -1.73
CKS2P33552 AC002127.1-201ENST00000421305 225 ntBASIC4.23□□□□□ -1.73
CKS2P33552 AL672212.1-201ENST00000422246 400 ntBASIC4.23□□□□□ -1.73
CKS2P33552 GYG1P2-201ENST00000426437 1006 ntBASIC4.23□□□□□ -1.73
CKS2P33552 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS2P33552 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS2P33552 RPL22P11-201ENST00000434894 385 ntBASIC4.23□□□□□ -1.73
CKS2P33552 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS2P33552 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS2P33552 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.23□□□□□ -1.73
CKS2P33552 SNORD125-201ENST00000459538 96 ntBASIC4.23□□□□□ -1.73
CKS2P33552 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS2P33552 RPS3AP49-201ENST00000472161 790 ntBASIC4.23□□□□□ -1.73
CKS2P33552 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.23□□□□□ -1.73
CKS2P33552 GM2AP2-201ENST00000491764 562 ntBASIC4.23□□□□□ -1.73
CKS2P33552 RN7SL350P-201ENST00000492591 299 ntBASIC4.23□□□□□ -1.73
CKS2P33552 AC106760.2-201ENST00000504159 619 ntBASIC4.23□□□□□ -1.73
CKS2P33552 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS2P33552 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS2P33552 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.23□□□□□ -1.73
CKS2P33552 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS2P33552 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.23□□□□□ -1.73
CKS2P33552 OR7E158P-201ENST00000524483 910 ntBASIC4.23□□□□□ -1.73
CKS2P33552 AP006437.1-202ENST00000530327 933 ntBASIC4.23□□□□□ -1.73
CKS2P33552 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC4.23□□□□□ -1.73
CKS2P33552 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS2P33552 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.23□□□□□ -1.73
CKS2P33552 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS2P33552 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS2P33552 RPL7AP69-201ENST00000595306 806 ntBASIC4.23□□□□□ -1.73
CKS2P33552 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS2P33552 FAM72A-208ENST00000607379 1139 ntBASIC4.23□□□□□ -1.73
CKS2P33552 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.23□□□□□ -1.73
CKS2P33552 AC096861.1-201ENST00000616652 240 ntBASIC4.23□□□□□ -1.73
CKS2P33552 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
CKS2P33552 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS2P33552 AC073488.3-201ENST00000631611 778 ntBASIC4.23□□□□□ -1.73
CKS2P33552 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC4.23□□□□□ -1.73
CKS2P33552 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.23□□□□□ -1.73
CKS2P33552 MFSD8-239ENST00000641590 2479 ntBASIC4.23□□□□□ -1.73
CKS2P33552 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 AC104623.2-202ENST00000623477 4002 ntBASIC4.23□□□□□ -1.73
CKS2P33552 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.23□□□□□ -1.73
CKS2P33552 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
CKS2P33552 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CKS2P33552 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.23□□□□□ -1.73
CKS2P33552 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CKS2P33552 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CKS2P33552 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS2P33552 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS2P33552 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS2P33552 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.22□□□□□ -1.73
CKS2P33552 MAPK10-338ENST00000641647 3362 ntBASIC4.22□□□□□ -1.73
CKS2P33552 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CKS2P33552 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CKS2P33552 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.22□□□□□ -1.73
CKS2P33552 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.22□□□□□ -1.73
CKS2P33552 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CKS2P33552 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS2P33552 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CKS2P33552 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS2P33552 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CKS2P33552 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.22□□□□□ -1.73
CKS2P33552 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CKS2P33552 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms