Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CNGA1P29973 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.38□□□□□ -1.23
CNGA1P29973 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CNGA1P29973 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.37□□□□□ -1.23
CNGA1P29973 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.37□□□□□ -1.23
CNGA1P29973 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNGA1P29973 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNGA1P29973 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.37□□□□□ -1.23
CNGA1P29973 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CNGA1P29973 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.37□□□□□ -1.23
CNGA1P29973 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNGA1P29973 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNGA1P29973 OR4K17-201ENST00000315543 1032 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 AC023490.2-201ENST00000359859 470 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
CNGA1P29973 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.37□□□□□ -1.23
CNGA1P29973 RNU6-925P-201ENST00000384629 104 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 LYPLA1P3-201ENST00000402650 695 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 RN7SKP229-201ENST00000410465 302 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 DHFRP2-201ENST00000414224 547 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 AC016769.2-201ENST00000414815 475 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 AC066692.1-201ENST00000421721 457 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.37□□□□□ -1.23
CNGA1P29973 AC104843.2-201ENST00000427666 297 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.37□□□□□ -1.23
CNGA1P29973 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.37□□□□□ -1.23
CNGA1P29973 AC018635.1-201ENST00000468292 1030 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 RN7SL101P-201ENST00000496350 279 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNGA1P29973 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.37□□□□□ -1.23
CNGA1P29973 RFPL4AP3-201ENST00000515267 345 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.37□□□□□ -1.23
CNGA1P29973 OSBPL9P3-201ENST00000534523 595 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 CD69-203ENST00000536709 1020 ntTSL 2 BASIC7.37□□□□□ -1.23
CNGA1P29973 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.37□□□□□ -1.23
CNGA1P29973 NOP56P3-201ENST00000549457 385 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.37□□□□□ -1.23
CNGA1P29973 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNGA1P29973 AC008507.3-201ENST00000585753 472 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.37□□□□□ -1.23
CNGA1P29973 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.37□□□□□ -1.23
CNGA1P29973 AC011445.2-201ENST00000599274 173 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 AC092681.3-201ENST00000609463 678 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 AC015722.2-201ENST00000622210 551 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 AP000577.1-201ENST00000624366 878 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 AC110597.1-201ENST00000562669 3176 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CNGA1P29973 AC003985.2-201ENST00000562268 1669 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CNGA1P29973 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CNGA1P29973 PABPC1P8-201ENST00000452851 2086 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 AC027279.4-201ENST00000624371 2072 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 UGT2B24P-201ENST00000514441 1597 ntBASIC7.37□□□□□ -1.23
CNGA1P29973 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.37□□□□□ -1.23
CNGA1P29973 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNGA1P29973 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CNGA1P29973 AL359976.1-201ENST00000418655 3528 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.36□□□□□ -1.23
CNGA1P29973 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CNGA1P29973 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.36□□□□□ -1.23
CNGA1P29973 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.36□□□□□ -1.23
CNGA1P29973 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.36□□□□□ -1.23
CNGA1P29973 NEK2P4-201ENST00000425793 1329 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 AL512310.3-201ENST00000547023 1335 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CNGA1P29973 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CNGA1P29973 CLCA3P-203ENST00000490028 2781 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CNGA1P29973 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CNGA1P29973 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.36□□□□□ -1.23
CNGA1P29973 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CNGA1P29973 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CNGA1P29973 RN7SKP81-201ENST00000365603 331 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CNGA1P29973 SNORD65-201ENST00000391079 73 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 AL451046.1-201ENST00000406097 534 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 AL359092.1-201ENST00000417156 265 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 AC245452.2-201ENST00000435222 392 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 EMC3-AS1-205ENST00000438698 534 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC7.36□□□□□ -1.23
CNGA1P29973 AL627224.1-201ENST00000448334 444 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.36□□□□□ -1.23
CNGA1P29973 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.36□□□□□ -1.23
CNGA1P29973 ATP5G1P3-201ENST00000463301 410 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 AC074386.1-201ENST00000476560 767 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 AC117395.1-201ENST00000487390 403 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 RPL5P14-201ENST00000494197 878 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
CNGA1P29973 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CNGA1P29973 AC112198.4-201ENST00000515450 351 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 SCARNA5-201ENST00000516201 276 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.36□□□□□ -1.23
CNGA1P29973 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.36□□□□□ -1.23
CNGA1P29973 AC079905.1-201ENST00000549280 475 ntBASIC7.36□□□□□ -1.23
CNGA1P29973 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.36□□□□□ -1.23
CNGA1P29973 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.36□□□□□ -1.23
CNGA1P29973 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.36□□□□□ -1.23
CNGA1P29973 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CNGA1P29973 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.36□□□□□ -1.23
CNGA1P29973 AC015849.2-201ENST00000605738 409 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 260.5 ms