Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A5P29400 AL353763.1-201ENST00000624467 1628 ntBASIC6.84□□□□□ -1.31
COL4A5P29400 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
COL4A5P29400 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
COL4A5P29400 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
COL4A5P29400 RPL21P133-201ENST00000443666 476 ntBASIC6.84□□□□□ -1.31
COL4A5P29400 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.84□□□□□ -1.31
COL4A5P29400 RPS18P6-201ENST00000476880 458 ntBASIC6.84□□□□□ -1.31
COL4A5P29400 AC105384.2-201ENST00000508433 640 ntBASIC6.84□□□□□ -1.31
COL4A5P29400 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A5P29400 GSTP1P1-201ENST00000548078 319 ntBASIC6.84□□□□□ -1.31
COL4A5P29400 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.84□□□□□ -1.31
COL4A5P29400 HNRNPCP1-201ENST00000556181 766 ntBASIC6.84□□□□□ -1.31
COL4A5P29400 NMNAT1P5-201ENST00000559657 841 ntBASIC6.84□□□□□ -1.31
COL4A5P29400 MIR4646-201ENST00000580775 63 ntBASIC6.84□□□□□ -1.31
COL4A5P29400 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A5P29400 AC006116.3-201ENST00000592968 361 ntBASIC6.84□□□□□ -1.31
COL4A5P29400 AC119674.1-217ENST00000641942 1086 ntBASIC6.84□□□□□ -1.31
COL4A5P29400 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A5P29400 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
COL4A5P29400 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
COL4A5P29400 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A5P29400 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A5P29400 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
COL4A5P29400 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A5P29400 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A5P29400 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.84□□□□□ -1.31
COL4A5P29400 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A5P29400 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A5P29400 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A5P29400 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.84□□□□□ -1.31
COL4A5P29400 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COL4A5P29400 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.32
COL4A5P29400 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL4A5P29400 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
COL4A5P29400 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL4A5P29400 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
COL4A5P29400 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.32
COL4A5P29400 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.84□□□□□ -1.32
COL4A5P29400 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.84□□□□□ -1.32
COL4A5P29400 AL133325.1-201ENST00000421090 382 ntBASIC6.84□□□□□ -1.32
COL4A5P29400 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
COL4A5P29400 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.84□□□□□ -1.32
COL4A5P29400 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.84□□□□□ -1.32
COL4A5P29400 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.84□□□□□ -1.32
COL4A5P29400 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.84□□□□□ -1.32
COL4A5P29400 RNU6-941P-201ENST00000516346 108 ntBASIC6.84□□□□□ -1.32
COL4A5P29400 MIR2117-201ENST00000516780 80 ntBASIC6.84□□□□□ -1.32
COL4A5P29400 AC090424.1-201ENST00000535243 736 ntBASIC6.84□□□□□ -1.32
COL4A5P29400 AC126615.2-201ENST00000553003 515 ntBASIC6.84□□□□□ -1.32
COL4A5P29400 AC127381.1-201ENST00000555979 939 ntBASIC6.84□□□□□ -1.32
COL4A5P29400 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.84□□□□□ -1.32
COL4A5P29400 AC011840.5-201ENST00000582125 771 ntBASIC6.84□□□□□ -1.32
COL4A5P29400 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.84□□□□□ -1.32
COL4A5P29400 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.84□□□□□ -1.32
COL4A5P29400 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A5P29400 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A5P29400 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.83□□□□□ -1.32
COL4A5P29400 AC011504.1-201ENST00000623331 4103 ntBASIC6.83□□□□□ -1.32
COL4A5P29400 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL4A5P29400 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A5P29400 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A5P29400 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A5P29400 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A5P29400 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
COL4A5P29400 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A5P29400 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A5P29400 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A5P29400 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COL4A5P29400 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.83□□□□□ -1.32
COL4A5P29400 AL139128.1-201ENST00000413921 941 ntBASIC6.83□□□□□ -1.32
COL4A5P29400 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.83□□□□□ -1.32
COL4A5P29400 AC092106.1-201ENST00000444291 373 ntBASIC6.83□□□□□ -1.32
COL4A5P29400 AC015864.1-201ENST00000496512 544 ntBASIC6.83□□□□□ -1.32
COL4A5P29400 AC105233.1-201ENST00000498840 781 ntBASIC6.83□□□□□ -1.32
COL4A5P29400 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.83□□□□□ -1.32
COL4A5P29400 AP001922.4-201ENST00000526967 290 ntBASIC6.83□□□□□ -1.32
COL4A5P29400 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A5P29400 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A5P29400 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A5P29400 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A5P29400 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A5P29400 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A5P29400 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.82□□□□□ -1.32
COL4A5P29400 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A5P29400 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COL4A5P29400 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COL4A5P29400 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A5P29400 RNA5SP333-201ENST00000363466 118 ntBASIC6.82□□□□□ -1.32
COL4A5P29400 RNA5SP334-201ENST00000364825 118 ntBASIC6.82□□□□□ -1.32
COL4A5P29400 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
COL4A5P29400 MIR141-201ENST00000384975 95 ntBASIC6.82□□□□□ -1.32
COL4A5P29400 RBMY2QP-201ENST00000429799 1147 ntBASIC6.82□□□□□ -1.32
COL4A5P29400 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A5P29400 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A5P29400 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms