Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RNA5SP514-201ENST00000363717 111 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 AC007068.1-201ENST00000396690 844 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 AL121578.1-201ENST00000428051 892 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.74□□□□□ -1.49
PTPN6P29350 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.74□□□□□ -1.49
PTPN6P29350 KRT8P51-201ENST00000438938 274 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 DNAJC19P5-201ENST00000443295 316 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.74□□□□□ -1.49
PTPN6P29350 RN7SL352P-201ENST00000466002 277 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.74□□□□□ -1.49
PTPN6P29350 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.74□□□□□ -1.49
PTPN6P29350 AC108103.1-201ENST00000511286 446 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.74□□□□□ -1.49
PTPN6P29350 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.74□□□□□ -1.49
PTPN6P29350 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.74□□□□□ -1.49
PTPN6P29350 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.74□□□□□ -1.49
PTPN6P29350 AC036111.2-201ENST00000533247 901 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.74□□□□□ -1.49
PTPN6P29350 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.74□□□□□ -1.49
PTPN6P29350 AL136097.3-201ENST00000611097 505 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.74□□□□□ -1.49
PTPN6P29350 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.74□□□□□ -1.49
PTPN6P29350 MAPK10-350ENST00000641777 965 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 PROS2P-201ENST00000474651 1951 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.74□□□□□ -1.49
PTPN6P29350 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PTPN6P29350 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
PTPN6P29350 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PTPN6P29350 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
PTPN6P29350 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PTPN6P29350 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PTPN6P29350 KYNUP3-201ENST00000574386 1341 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN6P29350 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN6P29350 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN6P29350 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.73□□□□□ -1.49
PTPN6P29350 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.73□□□□□ -1.49
PTPN6P29350 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PTPN6P29350 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.73□□□□□ -1.49
PTPN6P29350 RPL7AP14-201ENST00000424041 802 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
PTPN6P29350 RPSAP65-201ENST00000429660 595 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.73□□□□□ -1.49
PTPN6P29350 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.73□□□□□ -1.49
PTPN6P29350 RPSAP40-201ENST00000442343 891 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN6P29350 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.73□□□□□ -1.49
PTPN6P29350 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN6P29350 RN7SL254P-201ENST00000460609 284 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 RPL34P33-201ENST00000486062 334 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 RPL23AP40-201ENST00000487630 390 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 RPL37P23-201ENST00000492641 294 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.73□□□□□ -1.49
PTPN6P29350 AC095052.1-201ENST00000509955 863 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 HSD3BP3-201ENST00000514706 994 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN6P29350 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.73□□□□□ -1.49
PTPN6P29350 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.73□□□□□ -1.49
PTPN6P29350 NPM1P5-201ENST00000557228 838 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.73□□□□□ -1.49
PTPN6P29350 AC016839.1-201ENST00000578162 867 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.73□□□□□ -1.49
PTPN6P29350 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.73□□□□□ -1.49
PTPN6P29350 AC125494.2-201ENST00000602431 657 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 AL357140.4-201ENST00000636827 412 ntBASIC5.73□□□□□ -1.49
PTPN6P29350 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PTPN6P29350 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN6P29350 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN6P29350 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTPN6P29350 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN6P29350 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PTPN6P29350 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN6P29350 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN6P29350 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PTPN6P29350 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PTPN6P29350 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN6P29350 MSL3P1-202ENST00000440028 1468 ntBASIC5.72□□□□□ -1.49
PTPN6P29350 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN6P29350 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN6P29350 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PTPN6P29350 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN6P29350 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN6P29350 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms