Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 PDZK1P1-202ENST00000425209 1350 ntBASIC4.82□□□□□ -1.64
CCL3L1P16619 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCL3L1P16619 FBXL21-201ENST00000297158 1305 ntBASIC4.82□□□□□ -1.64
CCL3L1P16619 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCL3L1P16619 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCL3L1P16619 LYPLA1P3-201ENST00000402650 695 ntBASIC4.82□□□□□ -1.64
CCL3L1P16619 SNORA11.5-201ENST00000408163 128 ntBASIC4.82□□□□□ -1.64
CCL3L1P16619 MIR1203-201ENST00000408812 85 ntBASIC4.82□□□□□ -1.64
CCL3L1P16619 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.82□□□□□ -1.64
CCL3L1P16619 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCL3L1P16619 AC002069.1-201ENST00000429649 1159 ntBASIC4.82□□□□□ -1.64
CCL3L1P16619 KCTD9P1-201ENST00000430462 1167 ntBASIC4.82□□□□□ -1.64
CCL3L1P16619 DEFA9P-201ENST00000433042 285 ntBASIC4.82□□□□□ -1.64
CCL3L1P16619 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.82□□□□□ -1.64
CCL3L1P16619 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.82□□□□□ -1.64
CCL3L1P16619 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCL3L1P16619 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.82□□□□□ -1.64
CCL3L1P16619 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.82□□□□□ -1.64
CCL3L1P16619 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCL3L1P16619 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCL3L1P16619 AC079080.1-201ENST00000479841 822 ntBASIC4.82□□□□□ -1.64
CCL3L1P16619 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCL3L1P16619 GAPDHP71-201ENST00000511530 1003 ntBASIC4.82□□□□□ -1.64
CCL3L1P16619 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.82□□□□□ -1.64
CCL3L1P16619 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.82□□□□□ -1.64
CCL3L1P16619 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.82□□□□□ -1.64
CCL3L1P16619 AL356801.1-201ENST00000559320 294 ntBASIC4.82□□□□□ -1.64
CCL3L1P16619 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.82□□□□□ -1.64
CCL3L1P16619 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.82□□□□□ -1.64
CCL3L1P16619 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.82□□□□□ -1.64
CCL3L1P16619 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC4.82□□□□□ -1.64
CCL3L1P16619 MIR6778-201ENST00000617912 73 ntBASIC4.82□□□□□ -1.64
CCL3L1P16619 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.82□□□□□ -1.64
CCL3L1P16619 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.82□□□□□ -1.64
CCL3L1P16619 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CCL3L1P16619 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CCL3L1P16619 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCL3L1P16619 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.82□□□□□ -1.64
CCL3L1P16619 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCL3L1P16619 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCL3L1P16619 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCL3L1P16619 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC4.82□□□□□ -1.64
CCL3L1P16619 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCL3L1P16619 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL3L1P16619 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.81□□□□□ -1.64
CCL3L1P16619 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CCL3L1P16619 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL3L1P16619 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CCL3L1P16619 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL3L1P16619 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCL3L1P16619 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL3L1P16619 OR7E25P-201ENST00000344844 931 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 RNA5SP500-201ENST00000364486 119 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL3L1P16619 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL3L1P16619 OOSP1-201ENST00000398992 1270 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 OR2W4P-201ENST00000406496 926 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 RN7SKP29-201ENST00000410957 272 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 MRPL53P1-201ENST00000414323 319 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 RPS26P38-201ENST00000414476 348 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL3L1P16619 AC092651.1-201ENST00000426110 312 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 CDY8P-201ENST00000428380 1279 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL3L1P16619 USP24P1-201ENST00000433802 779 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL3L1P16619 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCL3L1P16619 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL3L1P16619 H3F3BP1-201ENST00000440551 403 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL3L1P16619 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.81□□□□□ -1.64
CCL3L1P16619 CDY20P-201ENST00000447528 1279 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 AC004129.2-201ENST00000457229 287 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 RNU1-88P-201ENST00000459274 128 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 AC099521.1-201ENST00000482557 334 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.81□□□□□ -1.64
CCL3L1P16619 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL3L1P16619 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.81□□□□□ -1.64
CCL3L1P16619 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL3L1P16619 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCL3L1P16619 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.81□□□□□ -1.64
CCL3L1P16619 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.81□□□□□ -1.64
CCL3L1P16619 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.81□□□□□ -1.64
CCL3L1P16619 AL049840.6-201ENST00000604583 345 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 AC108865.2-201ENST00000606881 432 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 AL365181.4-201ENST00000609800 547 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC4.81□□□□□ -1.64
CCL3L1P16619 AL096712.1-201ENST00000614561 159 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.81□□□□□ -1.64
CCL3L1P16619 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.81□□□□□ -1.64
CCL3L1P16619 AC129915.3-201ENST00000634128 948 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 AC087269.2-201ENST00000641764 975 ntBASIC4.81□□□□□ -1.64
CCL3L1P16619 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL3L1P16619 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
CCL3L1P16619 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCL3L1P16619 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCL3L1P16619 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.81□□□□□ -1.64
CCL3L1P16619 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms