Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFRAP16234 MTCO1P28-201ENST00000574177 1528 ntBASIC6.32□□□□□ -1.4
PDGFRAP16234 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
PDGFRAP16234 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFRAP16234 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFRAP16234 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.32□□□□□ -1.4
PDGFRAP16234 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFRAP16234 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFRAP16234 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFRAP16234 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFRAP16234 TRIM60P16-201ENST00000444048 694 ntBASIC6.32□□□□□ -1.4
PDGFRAP16234 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFRAP16234 AC098847.1-201ENST00000473094 348 ntBASIC6.32□□□□□ -1.4
PDGFRAP16234 RBBP4P1-201ENST00000502424 1276 ntBASIC6.32□□□□□ -1.4
PDGFRAP16234 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFRAP16234 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFRAP16234 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.32□□□□□ -1.4
PDGFRAP16234 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFRAP16234 RNU6-1334P-201ENST00000516032 105 ntBASIC6.32□□□□□ -1.4
PDGFRAP16234 RN7SKP5-201ENST00000517045 272 ntBASIC6.32□□□□□ -1.4
PDGFRAP16234 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFRAP16234 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFRAP16234 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFRAP16234 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.32□□□□□ -1.4
PDGFRAP16234 CYCSP38-201ENST00000559840 322 ntBASIC6.32□□□□□ -1.4
PDGFRAP16234 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.32□□□□□ -1.4
PDGFRAP16234 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFRAP16234 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFRAP16234 AL357562.1-201ENST00000624911 609 ntBASIC6.32□□□□□ -1.4
PDGFRAP16234 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFRAP16234 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PDGFRAP16234 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFRAP16234 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFRAP16234 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFRAP16234 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFRAP16234 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFRAP16234 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFRAP16234 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFRAP16234 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFRAP16234 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFRAP16234 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFRAP16234 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFRAP16234 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFRAP16234 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFRAP16234 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
PDGFRAP16234 AL355377.1-201ENST00000621125 1653 ntBASIC6.31□□□□□ -1.4
PDGFRAP16234 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFRAP16234 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFRAP16234 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PDGFRAP16234 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.31□□□□□ -1.4
PDGFRAP16234 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFRAP16234 AC245096.1-201ENST00000413104 546 ntBASIC6.31□□□□□ -1.4
PDGFRAP16234 VN1R3-201ENST00000418822 919 ntBASIC6.31□□□□□ -1.4
PDGFRAP16234 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.31□□□□□ -1.4
PDGFRAP16234 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFRAP16234 ACA64.4-201ENST00000459070 127 ntBASIC6.31□□□□□ -1.4
PDGFRAP16234 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFRAP16234 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
PDGFRAP16234 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFRAP16234 RN7SKP238-201ENST00000516483 249 ntBASIC6.31□□□□□ -1.4
PDGFRAP16234 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFRAP16234 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFRAP16234 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.31□□□□□ -1.4
PDGFRAP16234 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFRAP16234 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFRAP16234 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.31□□□□□ -1.4
PDGFRAP16234 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.31□□□□□ -1.4
PDGFRAP16234 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFRAP16234 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFRAP16234 AC125494.2-201ENST00000602431 657 ntBASIC6.31□□□□□ -1.4
PDGFRAP16234 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFRAP16234 uc_338.26-201ENST00000612659 160 ntBASIC6.31□□□□□ -1.4
PDGFRAP16234 MIR6778-201ENST00000617912 73 ntBASIC6.31□□□□□ -1.4
PDGFRAP16234 AC069234.4-201ENST00000621276 412 ntBASIC6.31□□□□□ -1.4
PDGFRAP16234 AC073488.3-201ENST00000631611 778 ntBASIC6.31□□□□□ -1.4
PDGFRAP16234 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFRAP16234 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PDGFRAP16234 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFRAP16234 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
PDGFRAP16234 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFRAP16234 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFRAP16234 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFRAP16234 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFRAP16234 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFRAP16234 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFRAP16234 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFRAP16234 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 AC004386.1-201ENST00000393214 761 ntBASIC6.3□□□□□ -1.4
PDGFRAP16234 AL096800.1-201ENST00000405326 893 ntBASIC6.3□□□□□ -1.4
PDGFRAP16234 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFRAP16234 MYL6P5-201ENST00000412707 459 ntBASIC6.3□□□□□ -1.4
PDGFRAP16234 AC013268.2-201ENST00000420753 337 ntBASIC6.3□□□□□ -1.4
PDGFRAP16234 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFRAP16234 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.3□□□□□ -1.4
PDGFRAP16234 AL365220.1-201ENST00000432923 399 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms