Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL365220.1-201ENST00000432923 399 ntBASIC5.63□□□□□ -1.51
SSX4O60224 ARMC4P1-201ENST00000438905 707 ntBASIC5.63□□□□□ -1.51
SSX4O60224 RPS10P18-201ENST00000442662 495 ntBASIC5.63□□□□□ -1.51
SSX4O60224 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX4O60224 TAAR4P-201ENST00000454843 1039 ntBASIC5.63□□□□□ -1.51
SSX4O60224 Z83838.1-202ENST00000456225 839 ntBASIC5.63□□□□□ -1.51
SSX4O60224 RARRES2P3-201ENST00000457739 473 ntBASIC5.63□□□□□ -1.51
SSX4O60224 AC089999.1-201ENST00000460336 374 ntBASIC5.63□□□□□ -1.51
SSX4O60224 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX4O60224 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX4O60224 RN7SL221P-201ENST00000466190 281 ntBASIC5.63□□□□□ -1.51
SSX4O60224 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX4O60224 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 AC018797.1-201ENST00000510791 255 ntBASIC5.63□□□□□ -1.51
SSX4O60224 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX4O60224 SETP21-201ENST00000514799 892 ntBASIC5.63□□□□□ -1.51
SSX4O60224 AC104997.1-201ENST00000519761 717 ntBASIC5.63□□□□□ -1.51
SSX4O60224 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX4O60224 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX4O60224 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX4O60224 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX4O60224 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 AC233702.7-202ENST00000582941 211 ntBASIC5.63□□□□□ -1.51
SSX4O60224 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX4O60224 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX4O60224 AC011921.2-201ENST00000589465 152 ntBASIC5.63□□□□□ -1.51
SSX4O60224 AC079315.1-201ENST00000602952 623 ntBASIC5.63□□□□□ -1.51
SSX4O60224 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX4O60224 AC008833.1-201ENST00000611633 691 ntBASIC5.63□□□□□ -1.51
SSX4O60224 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.63□□□□□ -1.51
SSX4O60224 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SSX4O60224 SAMM50P1-201ENST00000455403 1399 ntBASIC5.63□□□□□ -1.51
SSX4O60224 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SSX4O60224 AOX3P-204ENST00000491025 2107 ntBASIC5.63□□□□□ -1.51
SSX4O60224 OR51C1P-202ENST00000641159 1444 ntBASIC5.63□□□□□ -1.51
SSX4O60224 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX4O60224 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SSX4O60224 CR382285.2-201ENST00000624662 1495 ntBASIC5.63□□□□□ -1.51
SSX4O60224 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SSX4O60224 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SSX4O60224 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX4O60224 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SSX4O60224 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX4O60224 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SSX4O60224 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SSX4O60224 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SSX4O60224 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SSX4O60224 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.62□□□□□ -1.51
SSX4O60224 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX4O60224 MIR7-1-201ENST00000384871 110 ntBASIC5.62□□□□□ -1.51
SSX4O60224 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 NPM1P37-201ENST00000403105 874 ntBASIC5.62□□□□□ -1.51
SSX4O60224 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX4O60224 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.62□□□□□ -1.51
SSX4O60224 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX4O60224 MTND2P12-201ENST00000417560 1252 ntBASIC5.62□□□□□ -1.51
SSX4O60224 AC007562.1-201ENST00000421819 517 ntBASIC5.62□□□□□ -1.51
SSX4O60224 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX4O60224 RPL5P2-201ENST00000429598 854 ntBASIC5.62□□□□□ -1.51
SSX4O60224 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX4O60224 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX4O60224 GAPDHP33-201ENST00000443168 1013 ntBASIC5.62□□□□□ -1.51
SSX4O60224 AC023274.2-201ENST00000445264 521 ntBASIC5.62□□□□□ -1.51
SSX4O60224 AL022237.1-201ENST00000446663 358 ntBASIC5.62□□□□□ -1.51
SSX4O60224 RN7SL552P-201ENST00000462094 276 ntBASIC5.62□□□□□ -1.51
SSX4O60224 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX4O60224 AP003168.1-201ENST00000530091 307 ntBASIC5.62□□□□□ -1.51
SSX4O60224 AC005000.1-201ENST00000536192 288 ntBASIC5.62□□□□□ -1.51
SSX4O60224 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX4O60224 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX4O60224 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX4O60224 AC026826.3-201ENST00000561747 158 ntBASIC5.62□□□□□ -1.51
SSX4O60224 OR1E3-201ENST00000575608 948 ntBASIC5.62□□□□□ -1.51
SSX4O60224 RN7SL270P-201ENST00000579643 281 ntBASIC5.62□□□□□ -1.51
SSX4O60224 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.62□□□□□ -1.51
SSX4O60224 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.62□□□□□ -1.51
SSX4O60224 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.62□□□□□ -1.51
SSX4O60224 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX4O60224 AL162574.2-201ENST00000614618 657 ntBASIC5.62□□□□□ -1.51
SSX4O60224 AC004808.2-201ENST00000627965 773 ntBASIC5.62□□□□□ -1.51
SSX4O60224 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SSX4O60224 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX4O60224 AC105235.1-201ENST00000623208 1816 ntBASIC5.62□□□□□ -1.51
SSX4O60224 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX4O60224 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
SSX4O60224 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX4O60224 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms