Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM38O00635 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM38O00635 OSTCP4-201ENST00000424397 449 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 AC092865.3-201ENST00000425390 1026 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM38O00635 AL606490.7-201ENST00000433136 191 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 MTND6P5-201ENST00000448266 512 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM38O00635 CCRL1P1-201ENST00000449542 1053 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 AC104629.2-201ENST00000468627 598 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM38O00635 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.4□□□□□ -1.38
TRIM38O00635 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM38O00635 AC008429.2-201ENST00000523057 864 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 CYCSP25-201ENST00000525280 316 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM38O00635 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM38O00635 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM38O00635 AC092868.3-201ENST00000560515 784 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM38O00635 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.4□□□□□ -1.38
TRIM38O00635 AL671309.1-201ENST00000603750 544 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 AL352984.2-201ENST00000611153 546 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 AC097372.4-201ENST00000625025 466 ntBASIC6.4□□□□□ -1.38
TRIM38O00635 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM38O00635 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
TRIM38O00635 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM38O00635 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.4□□□□□ -1.39
TRIM38O00635 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.39
TRIM38O00635 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.4□□□□□ -1.39
TRIM38O00635 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
TRIM38O00635 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM38O00635 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.4□□□□□ -1.39
TRIM38O00635 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.4□□□□□ -1.39
TRIM38O00635 AC137056.2-201ENST00000624055 1958 ntBASIC6.4□□□□□ -1.39
TRIM38O00635 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM38O00635 AC104966.1-201ENST00000467010 1464 ntBASIC6.4□□□□□ -1.39
TRIM38O00635 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM38O00635 IMMTP1-201ENST00000435590 2219 ntBASIC6.4□□□□□ -1.39
TRIM38O00635 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM38O00635 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM38O00635 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM38O00635 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM38O00635 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
TRIM38O00635 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TRIM38O00635 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM38O00635 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM38O00635 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM38O00635 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TRIM38O00635 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM38O00635 AL359092.1-201ENST00000417156 265 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 RPL21P50-201ENST00000417698 477 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM38O00635 AC002127.1-201ENST00000421305 225 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 AL034379.1-201ENST00000423216 253 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM38O00635 NAP1L4P2-201ENST00000425958 899 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM38O00635 RPSAP65-201ENST00000429660 595 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 MTATP6P17-201ENST00000431030 672 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 AMYP1-201ENST00000440059 1023 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 DNAJA1P5-201ENST00000440278 943 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 VN1R48P-201ENST00000448149 1036 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 HMGB1P7-201ENST00000450921 612 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 AP002345.1-201ENST00000456493 928 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 RN7SL254P-201ENST00000460609 284 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 EIF2S2P4-201ENST00000461070 984 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM38O00635 CAB39P1-201ENST00000502277 460 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 UGT2A3P7-201ENST00000510485 734 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 HMGB1P47-201ENST00000511281 589 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM38O00635 RN7SKP67-201ENST00000515905 235 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM38O00635 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM38O00635 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM38O00635 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM38O00635 AC002519.2-203ENST00000567043 837 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 AL049840.5-201ENST00000602827 552 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM38O00635 AC020978.9-201ENST00000624380 1141 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM38O00635 AL357140.4-201ENST00000636827 412 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM38O00635 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.39□□□□□ -1.39
TRIM38O00635 AC083899.2-201ENST00000423285 1376 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM38O00635 CASC19-246ENST00000641625 1606 ntBASIC6.39□□□□□ -1.39
TRIM38O00635 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
TRIM38O00635 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM38O00635 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM38O00635 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
TRIM38O00635 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM38O00635 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms