Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 SNRPCP20-201ENST00000588011 210 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC006115.2-201ENST00000596823 202 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AL122127.1-201ENST00000603832 327 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AP001554.1-201ENST00000604533 376 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL778P-201ENST00000607160 297 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC093635.1-201ENST00000609028 555 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AL031777.2-201ENST00000611953 196 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AL158196.1-201ENST00000616786 434 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC009237.17-201ENST00000618111 748 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR7854-201ENST00000620068 65 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC079298.2-201ENST00000623885 459 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AL139220.2-209ENST00000626342 826 ntTSL 5 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC073488.5-201ENST00000631993 754 ntBASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHKB-CPT1BH3BT56 FGL1-202ENST00000381841 1374 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 IKZF3-214ENST00000467757 1362 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 GMFG-201ENST00000253054 616 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RNA5SP18-201ENST00000390935 121 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 U3.28-201ENST00000391249 210 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RNA5SP53-201ENST00000391299 120 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AL354707.3-201ENST00000427308 331 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RPS23P9-201ENST00000448848 438 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC022080.2-201ENST00000452932 533 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RPLP0P1-201ENST00000457002 361 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL492P-201ENST00000460700 295 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC021660.1-201ENST00000465006 554 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC009078.1-201ENST00000474978 783 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL302P-201ENST00000475999 300 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC079594.1-201ENST00000489757 331 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL19P11-201ENST00000495944 589 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AL031073.1-201ENST00000503029 1139 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RASA2-IT1-201ENST00000507770 612 ntTSL 3 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 SNORA70.23-201ENST00000517218 151 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RPS20-202ENST00000518875 671 ntTSL 2 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 NPM1P6-201ENST00000521088 871 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 OR6M2P-201ENST00000529831 871 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 ASB8-202ENST00000535055 657 ntTSL 2 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC024901.1-201ENST00000535764 718 ntTSL 3 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 ASB8-203ENST00000535988 679 ntTSL 2 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC124891.1-201ENST00000536322 519 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC006349.1-201ENST00000555526 235 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC009997.1-201ENST00000557862 129 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC133569.1-201ENST00000564327 373 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms