Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 AC068768.2-201ENST00000602352 343 ntBASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 AC006924.1-201ENST00000610750 559 ntBASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 RN7SL261P-201ENST00000613441 282 ntBASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 MIR6861-201ENST00000618657 64 ntBASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 AP001885.1-201ENST00000621658 558 ntBASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 GTF2IP4-201ENST00000453092 2054 ntBASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 WBP11P1-201ENST00000562560 1931 ntBASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 LYARP1-201ENST00000436977 1501 ntBASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
SYNPO2Q9UMS6 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 GUCY1B2-204ENST00000531898 1979 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AL136531.3-201ENST00000624378 3658 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 UBE2V1P14-201ENST00000415815 558 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 DPPA2P2-201ENST00000418220 897 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC092473.1-201ENST00000441098 221 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AL606490.8-201ENST00000441624 319 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 MTND5P8-201ENST00000449817 1083 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC023194.2-201ENST00000465398 406 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC094085.1-201ENST00000468914 584 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 NPM1P27-201ENST00000502784 830 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 CR383658.1-201ENST00000514609 734 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC027338.1-201ENST00000514840 825 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AP004609.2-201ENST00000532177 190 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC090115.2-201ENST00000548060 883 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC120053.1-201ENST00000607706 736 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC004801.6-201ENST00000616571 978 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AL512652.1-201ENST00000619006 500 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 CCNT2P1-201ENST00000423082 1315 ntBASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
SYNPO2Q9UMS6 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 AP000432.2-201ENST00000624164 2048 ntBASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 CASC19-238ENST00000641523 1558 ntBASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 Y_RNA.62-201ENST00000362840 99 ntBASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 AL353692.2-201ENST00000407054 335 ntBASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 AL445528.1-201ENST00000426330 420 ntBASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 AC023141.6-201ENST00000429418 337 ntBASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 AC023141.3-201ENST00000436698 278 ntBASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 DNAJA1P5-201ENST00000440278 943 ntBASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNPO2Q9UMS6 RPL31P53-201ENST00000457065 348 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms