Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNA5SP435-201ENST00000364044 108 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 RNA5SP510-201ENST00000364697 99 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 SNRPEP6-201ENST00000407465 277 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC007568.1-201ENST00000422912 471 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC079922.1-201ENST00000443291 359 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC007998.1-201ENST00000474156 672 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 SNORD46.2-201ENST00000516021 102 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 SUMO2P19-201ENST00000518920 295 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC022826.1-201ENST00000519383 805 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AP000648.1-201ENST00000529682 397 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 MIR3614-201ENST00000581261 86 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AL031601.1-201ENST00000605702 394 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AL021918.2-201ENST00000613415 194 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC016583.1-201ENST00000624221 2431 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 AC022034.1-201ENST00000512867 2156 ntBASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCF1Q9UBD9 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 SELENOWP1-201ENST00000322792 252 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 RNA5SP284-201ENST00000384547 118 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 AC092642.1-201ENST00000392417 425 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 AC016739.1-201ENST00000405359 345 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 RN7SKP166-201ENST00000410812 305 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 AC007562.1-201ENST00000421819 517 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 AC104843.2-201ENST00000427666 297 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 MTND6P12-201ENST00000428247 522 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 AC023274.2-201ENST00000445264 521 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 AC104164.1-201ENST00000460282 590 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 RN7SL352P-201ENST00000466002 277 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 PSMA2P2-201ENST00000504319 686 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 PCNAP4-201ENST00000532690 730 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 COX6CP7-201ENST00000597056 208 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 AC026124.2-201ENST00000621847 656 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 AC008691.1-209ENST00000642094 814 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 AC073365.1-203ENST00000641055 1992 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.34□□□□□ -1.55
CLCF1Q9UBD9 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.34□□□□□ -1.56
CLCF1Q9UBD9 AL355377.1-201ENST00000621125 1653 ntBASIC5.34□□□□□ -1.56
CLCF1Q9UBD9 AP001157.1-201ENST00000550837 2339 ntBASIC5.34□□□□□ -1.56
CLCF1Q9UBD9 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CLCF1Q9UBD9 AL353763.1-201ENST00000624467 1628 ntBASIC5.34□□□□□ -1.56
CLCF1Q9UBD9 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms