Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 MIR323B-201ENST00000385269 82 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 RN7SKP161-201ENST00000411110 305 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 CDY17P-201ENST00000414121 1282 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 RPL12P12-201ENST00000424633 501 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 SEC63P1-201ENST00000425785 1258 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 AC017019.1-201ENST00000426129 261 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 GEMIN2P1-201ENST00000454246 752 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 AC011476.1-201ENST00000466725 307 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 SETP12-201ENST00000514068 805 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 IGLVIV-64-201ENST00000518581 301 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 AC019227.1-201ENST00000526902 510 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 AC092121.1-201ENST00000569452 202 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 RPL12P48-201ENST00000605620 304 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 AC103703.1-201ENST00000634783 663 ntBASIC6.9□□□□□ -1.3
COL20A1Q9P218 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL20A1Q9P218 RBPJP7-201ENST00000442803 1447 ntBASIC6.9□□□□□ -1.31
COL20A1Q9P218 RBPJP5-201ENST00000449433 1447 ntBASIC6.9□□□□□ -1.31
COL20A1Q9P218 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.9□□□□□ -1.31
COL20A1Q9P218 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
COL20A1Q9P218 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL20A1Q9P218 AL359091.1-201ENST00000449048 1734 ntBASIC6.9□□□□□ -1.31
COL20A1Q9P218 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL20A1Q9P218 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL20A1Q9P218 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 GNL2P1-201ENST00000451274 2190 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 AC016251.2-201ENST00000623393 3089 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 OR52B3P-201ENST00000314715 928 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 AC092642.1-201ENST00000392417 425 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 AL358178.1-201ENST00000407698 397 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 AC007998.1-201ENST00000474156 672 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 AC112206.4-201ENST00000515142 405 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 NPM1P52-201ENST00000518264 846 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 OR4A40P-201ENST00000533878 948 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 AC067852.5-201ENST00000589299 310 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 FAM60CP-201ENST00000591086 664 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 AC026367.3-201ENST00000619032 590 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 AC119674.1-220ENST00000641502 1048 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 AL513548.1-201ENST00000562904 1724 ntBASIC6.89□□□□□ -1.31
COL20A1Q9P218 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL20A1Q9P218 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.89□□□□□ -1.31
COL20A1Q9P218 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms