Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC096553.1-201ENST00000605169 829 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC016727.1-205ENST00000605437 569 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 LARP7P1-201ENST00000605576 316 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC131235.4-201ENST00000609288 620 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC005790.1-201ENST00000619774 450 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AL133370.2-201ENST00000619934 439 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC010480.1-201ENST00000624823 684 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 VEZF1P1-201ENST00000423931 1541 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 AC079298.1-201ENST00000625026 1619 ntBASIC7.04□□□□□ -1.28
SSU72Q9NP77 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.04□□□□□ -1.28
SSU72Q9NP77 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSU72Q9NP77 DDX50P1-201ENST00000438163 2400 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC022905.1-201ENST00000503430 3048 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 WBP11P1-201ENST00000562560 1931 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC073429.2-201ENST00000569694 1444 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC125603.4-201ENST00000621942 2699 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 Y_RNA.88-201ENST00000363029 99 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 SNORD65C-201ENST00000390962 71 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 PTMAP8-201ENST00000397729 342 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC113608.1-201ENST00000398740 305 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AL355862.1-201ENST00000412705 353 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC016831.2-201ENST00000417179 352 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC023128.2-201ENST00000420880 1223 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC097721.1-201ENST00000427150 1253 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 MTCO1P52-201ENST00000433928 531 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC007327.1-201ENST00000447461 264 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 OR51P1P-201ENST00000447547 942 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC114755.1-201ENST00000453101 868 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC027673.1-201ENST00000456245 405 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 SNORA81.1-201ENST00000458922 177 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC090589.1-201ENST00000473109 362 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC069528.1-202ENST00000482888 637 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC117395.1-201ENST00000487390 403 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 ARL4AP1-201ENST00000503220 705 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC109458.1-201ENST00000508858 316 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC008885.2-201ENST00000509506 930 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC103968.1-201ENST00000557841 573 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC243312.1-201ENST00000570582 275 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC136944.5-201ENST00000573021 151 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 WDR45BP1-201ENST00000583470 1029 ntBASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.03□□□□□ -1.28
SSU72Q9NP77 AC022146.1-201ENST00000595307 847 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms